RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 RETREG3Q86VR2 466 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 LSRQ86X29 649 aaPredicted RBP13.34□□□□□ -0.27
YIF1A-208ENST00000485820 ZNF440Q8IYI8 595 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 TSPEARQ8WU66 669 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 SPATA9Q9BWV2 254 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 TMEM120AQ9BXJ8 343 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 OR11A1Q9GZK7 315 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 LIME1Q9H400 295 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 BCO1Q9HAY6 547 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 KLHL13Q9P2N7 655 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 LEF1Q9UJU2 399 aaPredicted RBP13.34□□□□□ -0.27
YIF1A-208ENST00000485820 NDUFAF1Q9Y375 327 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 TMED7Q9Y3B3 224 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 TESMINQ9Y4I5 508 aa13.34□□□□□ -0.27
YIF1A-208ENST00000485820 CYTIPO60759 359 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 GOSR1O95249 250 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 PMS2P2O95744 297 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 HRGP04196 525 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 ARAFP10398 606 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 TFPIP10646 304 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 PRG2P13727 222 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 ETS2P15036 469 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 CCNA2P20248 432 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 TACR3P29371 465 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 DNAJA1P31689 397 aaKnown RBP13.33□□□□□ -0.28
YIF1A-208ENST00000485820 POLR2HP52434 150 aaKnown RBP13.33□□□□□ -0.28
YIF1A-208ENST00000485820 ADRM1Q16186 407 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 ZSWIM7Q19AV6 140 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 EXOC3L2Q2M3D2 409 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 TMEM201Q5SNT2 666 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 STAC2Q6ZMT1 411 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 BEND4Q6ZU67 534 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 MTDHQ86UE4 582 aaKnown RBP13.33□□□□□ -0.28
YIF1A-208ENST00000485820 DPP10Q8N608 796 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 BBS10Q8TAM1 723 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 PSD2Q9BQI7 771 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 CPPED1Q9BRF8 314 aaPredicted RBP13.33□□□□□ -0.28
YIF1A-208ENST00000485820 CCDC134Q9H6E4 229 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 C12orf49Q9H741 205 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 FGFR1OP2Q9NVK5 253 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 KLHL28Q9NXS3 571 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 TRAPPC4Q9Y296 219 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 IFT52Q9Y366 437 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 HDGFL3Q9Y3E1 203 aa13.33□□□□□ -0.28
YIF1A-208ENST00000485820 SPIN1Q9Y657 262 aaPredicted RBP13.33□□□□□ -0.28
YIF1A-208ENST00000485820 HRNRQ86YZ3 2850 aaPredicted RBP13.32□□□□□ -0.28
YIF1A-208ENST00000485820 TMEM72A0PK05 275 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 EVPLLA8MZ36 301 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 CASKO14936 926 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 ZNF208O43345 1280 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 MAP2K6P52564 334 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 CSNK2A1P68400 391 aaPredicted RBP13.32□□□□□ -0.28
YIF1A-208ENST00000485820 CDK6Q00534 326 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 GUCY1A3Q02108 690 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 RASGEF1BQ0VAM2 473 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 TESK1Q15569 626 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 ZNF311Q5JNZ3 666 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 GCNT6Q5T4J0 391 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 ANKRD34AQ69YU3 496 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 REEP3Q6NUK4 255 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 TFAP2EQ6VUC0 442 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 ZNF550Q7Z398 422 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 NFKBIDQ8NI38 313 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 DNAJA3Q96EY1 480 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 ANKRD27Q96NW4 1050 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 KLHL4Q9C0H6 718 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 TMEM38AQ9H6F2 299 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 PLEKHF2Q9H8W4 249 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 KLHL9Q9P2J3 617 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 ITGB1BP2Q9UKP3 347 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 OTOGQ6ZRI0 2925 aa13.32□□□□□ -0.28
YIF1A-208ENST00000485820 A0A1W2PPR1 153 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 ZC3H12DA2A288 527 aaKnown RBP13.31□□□□□ -0.28
YIF1A-208ENST00000485820 ZNF724A8MTY0 619 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 ZNF814B7Z6K7 855 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 SIAH2O43255 324 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 FESP07332 822 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 VIMP08670 466 aaKnown RBP13.31□□□□□ -0.28
YIF1A-208ENST00000485820 TROVE2P10155 538 aaKnown RBP eCLIP13.31□□□□□ -0.28
YIF1A-208ENST00000485820 IMPDH2P12268 514 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 ARFIP2P53365 341 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 H3F3AP84243 136 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 PDK3Q15120 406 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 WBP2NLQ6ICG8 309 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 SERPINA11Q86U17 422 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 STK32CQ86UX6 486 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 GABRG1Q8N1C3 465 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 ZNF775Q96BV0 537 aaPredicted RBP13.31□□□□□ -0.28
YIF1A-208ENST00000485820 ZNF300Q96RE9 604 aaPredicted RBP13.31□□□□□ -0.28
YIF1A-208ENST00000485820 TACO1Q9BSH4 297 aaKnown RBP13.31□□□□□ -0.28
YIF1A-208ENST00000485820 ARMC7Q9H6L4 198 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 MED4Q9NPJ6 270 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 TMEM181Q9P2C4 612 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.31□□□□□ -0.28
YIF1A-208ENST00000485820 CORO2BQ9UQ03 480 aa13.31□□□□□ -0.28
YIF1A-208ENST00000485820 IGKV3D-15A0A087WSY6 115 aa13.3□□□□□ -0.28
YIF1A-208ENST00000485820 UQCRHLA0A096LP55 91 aa13.3□□□□□ -0.28
YIF1A-208ENST00000485820 DEFB108AA8MXU0 73 aa13.3□□□□□ -0.28
YIF1A-208ENST00000485820 C5orf58C9J3I9 102 aa13.3□□□□□ -0.28
YIF1A-208ENST00000485820 FBP2O00757 339 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms