RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TNFRSF11BO00300 401 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 ZNF208O43345 1280 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 GCKP35557 465 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 RBM34P42696 430 aaKnown RBP15.86■□□□□ 0.13
CHMP3-207ENST00000485465 RAC1P63000 192 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.86■□□□□ 0.13
CHMP3-207ENST00000485465 FGD3Q5JSP0 725 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 HMBOX1Q6NT76 420 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 TTC33Q6PID6 262 aaPredicted RBP15.86■□□□□ 0.13
CHMP3-207ENST00000485465 AMIGO2Q86SJ2 522 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 LILRA2Q8N149 483 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 ATP6V1C2Q8NEY4 427 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 OR4C15Q8NGM1 316 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 SLC7A13Q8TCU3 470 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 TMEM255BQ8WV15 326 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 FAR1Q8WVX9 515 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 HS6ST2Q96MM7 605 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 PKP2Q99959 881 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 FUZQ9BT04 418 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 ZNF426Q9BUY5 554 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 EXO5Q9H790 373 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 NTN4Q9HB63 628 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 PLSCR2Q9NRY7 297 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 SAMHD1Q9Y3Z3 626 aaKnown RBP15.86■□□□□ 0.13
CHMP3-207ENST00000485465 SPIN1Q9Y657 262 aaPredicted RBP15.86■□□□□ 0.13
CHMP3-207ENST00000485465 AP4B1Q9Y6B7 739 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 BSNQ9UPA5 3926 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 NBEAQ8NFP9 2946 aa15.86■□□□□ 0.13
CHMP3-207ENST00000485465 IGKV1D-42A0A075B6H8 117 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 TRBV4-1A0A0J9YWV2 114 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 A8MVM7 634 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 H0Y3Z8 333 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 H3BML4 177 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 BAG2O95816 211 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 ACTL6AO96019 429 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 PEPDP12955 493 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 BMP7P18075 431 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 FKBP2P26885 142 aaKnown RBP15.85■□□□□ 0.13
CHMP3-207ENST00000485465 LIMS1P48059 325 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 NFATC3Q12968 1075 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 PPP1R8Q12972 351 aaKnown RBP15.85■□□□□ 0.13
CHMP3-207ENST00000485465 GK3PQ14409 553 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 RCN1Q15293 331 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 EXOC3L2Q2M3D2 409 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 PRR30Q53SZ7 412 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-207ENST00000485465 NHSL2Q5HYW2 709 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 DCST1Q5T197 706 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 C3orf33Q6P1S2 294 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 PODNL1Q6PEZ8 512 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 STK35Q8TDR2 534 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 SLC25A43Q8WUT9 341 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-207ENST00000485465 TMEM239Q8WW34 195 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 ACOT11Q8WXI4 607 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-207ENST00000485465 ABTB1Q969K4 478 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-207ENST00000485465 GPR137Q96N19 417 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 ALPK1Q96QP1 1244 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 EPYCQ99645 322 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 TMEM43Q9BTV4 400 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 BDH2Q9BUT1 245 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 TMEM185BQ9H7F4 350 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 SPRR3Q9UBC9 169 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 U3KQV3 271 aa15.85■□□□□ 0.13
CHMP3-207ENST00000485465 BOD1L1Q8NFC6 3051 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 A0A087WUU8 490 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 TTLL8A6PVC2 850 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 OPN1LWP04000 364 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 POU3F2P20265 443 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-207ENST00000485465 PTNP21246 168 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 DNAJA1P31689 397 aaKnown RBP15.84■□□□□ 0.13
CHMP3-207ENST00000485465 STARP49675 285 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 LHX2P50458 406 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 IST1P53990 364 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 UGT2B15P54855 530 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 EGR4Q05215 589 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 SEC23BQ15437 767 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 KRTCAP3Q53RY4 240 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 VASNQ6EMK4 673 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 TBPL2Q6SJ96 375 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 ZNF730Q6ZMV8 503 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 P3H2Q8IVL5 708 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 PQLC1Q8N2U9 271 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 DDIT4LQ96D03 193 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 CENPNQ96H22 339 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-207ENST00000485465 BARD1Q99728 777 aaKnown RBP15.84■□□□□ 0.13
CHMP3-207ENST00000485465 SLC19A3Q9BZV2 496 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 OR11A1Q9GZK7 315 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 DCLRE1BQ9H816 532 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 ASF1BQ9NVP2 202 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 STOML1Q9UBI4 398 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 TMCC3Q9ULS5 477 aa15.84■□□□□ 0.13
CHMP3-207ENST00000485465 SH3PXD2BA1X283 911 aa15.83■□□□□ 0.12
CHMP3-207ENST00000485465 ZC3H12DA2A288 527 aaKnown RBP15.83■□□□□ 0.12
CHMP3-207ENST00000485465 GJE1A6NN92 205 aa15.83■□□□□ 0.12
CHMP3-207ENST00000485465 AQP7O14520 342 aa15.83■□□□□ 0.12
CHMP3-207ENST00000485465 MGRN1O60291 552 aa15.83■□□□□ 0.12
CHMP3-207ENST00000485465 NPIPB7O75200 414 aa15.83■□□□□ 0.12
CHMP3-207ENST00000485465 E2F6O75461 281 aa15.83■□□□□ 0.12
CHMP3-207ENST00000485465 TFPIP10646 304 aa15.83■□□□□ 0.12
CHMP3-207ENST00000485465 ANPEPP15144 967 aa15.83■□□□□ 0.12
CHMP3-207ENST00000485465 SHC1P29353 583 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms