RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	GNG12	Q9UBI6	72 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	ASIC3	Q9UHC3	531 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	RNF24	Q9Y225	148 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	RNF115	Q9Y4L5	304 aa		3.13	□□□□□ -1.91
VPS8-223	ENST00000485024	IGHV3OR16-10	A0A075B7F0	116 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024		A0A1B0GTH9	108 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	OR6C65	A6NJZ3	312 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	FAM74A7	A6NL05	159 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	TSC22D2	O75157	780 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	UGT2B17	O75795	530 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	TM7SF2	O76062	418 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	JCHAIN	P01591	159 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	HCK	P08631	526 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	RBMX	P38159	391 aa	Known RBP	3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	MAGEA5	P43359	124 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	ATP4B	P51164	291 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	RND3	P61587	244 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	PLOD1	Q02809	727 aa	Predicted RBP	3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	FGL1	Q08830	312 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	CYP51A1	Q16850	503 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	FAM74A3	Q4VXF1	159 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	TEX44	Q53QW1	395 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	C9orf66	Q5T8R8	295 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	ATF7IP2	Q5U623	682 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	METTL11B	Q5VVY1	283 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	FAM219B	Q5XKK7	198 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	FAHD2B	Q6P2I3	314 aa	Predicted RBP	3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	DOK6	Q6PKX4	331 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	RUFY3	Q7L099	469 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	EFL1	Q7Z2Z2	1120 aa	Known RBP	3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	MOB3B	Q86TA1	216 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	SUMF1	Q8NBK3	374 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	RFESD	Q8TAC1	157 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	TBCK	Q8TEA7	893 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	NTNG2	Q96CW9	530 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	C11orf24	Q96F05	449 aa	Predicted RBP	3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	FAHD2A	Q96GK7	314 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	PKIB	Q9C010	78 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	ADGRL4	Q9HBW9	690 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	IMPAD1	Q9NX62	359 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	PIPOX	Q9P0Z9	390 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	RCOR3	Q9P2K3	495 aa	Predicted RBP	3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	CHRNA9	Q9UGM1	479 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	ANAPC7	Q9UJX3	599 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	DOT1L	Q8TEK3	1739 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	DNHD1	Q96M86	4753 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	SPG11	Q96JI7	2443 aa		3.12	□□□□□ -1.91
VPS8-223	ENST00000485024	RIC1	Q4ADV7	1423 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	SMG1	Q96Q15	3661 aa	Known RBP	3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	IGKV3D-15	A0A087WSY6	115 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	IGHV3-16	A0A0C4DH30	117 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024		A0A0J9YWU9	116 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNF487	B1APH4	448 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	BTN3A3	O00478	584 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	ARPC3	O15145	178 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	MSH4	O15457	936 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	ZNF208	O43345	1280 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	SNN	O75324	88 aa	Predicted RBP	3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	SH3BGRL	O75368	114 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TPSB2	P20231	275 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	CDH5	P33151	784 aa	Predicted RBP	3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	GRIA1	P42261	906 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	PTGER3	P43115	390 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	RPL23A	P62750	156 aa	Known RBP	3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	PAX8	Q06710	450 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	DDX39B	Q13838	428 aa	Known RBP	3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TPSAB1	Q15661	275 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	CCL14	Q16627	93 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TMEM44	Q2T9K0	475 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	FAM71F2	Q6NXP2	309 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	ADAMTSL5	Q6ZMM2	481 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	STAC2	Q6ZMT1	411 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	NLRP9	Q7RTR0	991 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TAS2R42	Q7RTR8	314 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	NANOGNB	Q7Z5D8	188 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	UBQLNL	Q8IYU4	475 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	BPIFB2	Q8N4F0	458 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	DHRSX	Q8N5I4	330 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024		Q8N9G6	341 aa	Predicted RBP	3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TRPV1	Q8NER1	839 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	MIPOL1	Q8TD10	442 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TUBGCP3	Q96CW5	907 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	ZBED6CL	Q96FA7	236 aa	Predicted RBP	3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TPD52L3	Q96J77	140 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TGM7	Q96PF1	710 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TRIM15	Q9C019	465 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	TIGAR	Q9NQ88	270 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	NANS	Q9NR45	359 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	CTNNA3	Q9UI47	895 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	PRSS21	Q9Y6M0	314 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	CELSR3	Q9NYQ7	3312 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	ITPR1	Q14643	2758 aa		3.11	□□□□□ -1.91
VPS8-223	ENST00000485024	SLX4	Q8IY92	1834 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	TRAV26-1	A0A087WT03	109 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	CCL15-CCL14	A0A0B4J2E2	113 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024		A0A0U1RQS6	177 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	OR7A17	O14581	309 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	PRRG1	O14668	218 aa		3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	SURF6	O75683	361 aa	Known RBP	3.1	□□□□□ -1.91
VPS8-223	ENST00000485024	LRAT	O95237	230 aa		3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms