RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TACC2O95359 2948 aa16.09■□□□□ 0.17
HDAC6-225ENST00000483506 TMED7-TICAM2A0A0A6YYA0 188 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 A0A1W2PNR3 127 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 MRASO14807 208 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 DNPH1O43598 174 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 CCDC22O60826 627 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 GKN3PP0CG01 181 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 TACR3P29371 465 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 SEC24CP53992 1094 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 CAPRIN1Q14444 709 aaKnown RBP16.08■□□□□ 0.16
HDAC6-225ENST00000483506 CYP51A1Q16850 503 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 WBP2NLQ6ICG8 309 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 FCRLAQ7L513 359 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 SLC30A8Q8IWU4 369 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 SLC43A2Q8N370 569 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 BHLHE22Q8NFJ8 381 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-225ENST00000483506 OR5B2Q96R09 309 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 ZNF607Q96SK3 696 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 SH3GL1Q99961 368 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 RBM24Q9BX46 236 aaKnown RBP16.08■□□□□ 0.16
HDAC6-225ENST00000483506 GALNT8Q9NY28 637 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 TMED7Q9Y3B3 224 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 EMC9Q9Y3B6 208 aa16.08■□□□□ 0.16
HDAC6-225ENST00000483506 PRORSD1PA6NEY8 169 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 PMS2P2O95744 297 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 PRG2P13727 222 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 DRD4P21917 467 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 PCGF2P35227 344 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 DIO1P49895 249 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 CSNK2A1P68400 391 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-225ENST00000483506 MMEL1Q495T6 779 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 PPP4R4Q6NUP7 873 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 ZNF474Q6S9Z5 364 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-225ENST00000483506 LUZP2Q86TE4 346 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 ZZZ3Q8IYH5 903 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 PCYOX1LQ8NBM8 494 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 RP9Q8TA86 221 aaKnown RBP16.07■□□□□ 0.16
HDAC6-225ENST00000483506 ROBO4Q8WZ75 1007 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 REXO5Q96IC2 774 aaKnown RBP16.07■□□□□ 0.16
HDAC6-225ENST00000483506 SLC39A3Q9BRY0 314 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 PLSCR4Q9NRQ2 329 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 ARMCX1Q9P291 453 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 KLHL13Q9P2N7 655 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 TRAPPC4Q9Y296 219 aa16.07■□□□□ 0.16
HDAC6-225ENST00000483506 LOC100653049A0A140TA62 436 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 TMEM72A0PK05 275 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 SMAD9O15198 467 aaKnown RBP16.06■□□□□ 0.16
HDAC6-225ENST00000483506 SNX3O60493 162 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 CYTIPO60759 359 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 GCM2O75603 506 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-225ENST00000483506 SERPINB7O75635 380 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 KRT34O76011 436 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 MFN2O95140 757 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 PLGP00747 810 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-225ENST00000483506 ENPP1P22413 925 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 AGTR1P30556 359 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 KIR2DL3P43628 341 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 CPA2P48052 419 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 CTBP2P56545 445 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 COPZ1P61923 177 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 SIRPAP78324 504 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 MYBPHQ13203 477 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 COMTD1Q86VU5 262 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 CALHM3Q86XJ0 350 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 OR10A6Q8NH74 314 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 FAM222BQ8WU58 562 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 ABHD3Q8WU67 409 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 ARL5BQ96KC2 179 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 ELAC2Q9BQ52 826 aaKnown RBP16.06■□□□□ 0.16
HDAC6-225ENST00000483506 TACO1Q9BSH4 297 aaKnown RBP16.06■□□□□ 0.16
HDAC6-225ENST00000483506 NSRP1Q9H0G5 558 aaKnown RBP16.06■□□□□ 0.16
HDAC6-225ENST00000483506 MYLK2Q9H1R3 596 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 OPN3Q9H1Y3 402 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-225ENST00000483506 EVA1AQ9H8M9 152 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 BCO1Q9HAY6 547 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 ING1Q9UK53 422 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-225ENST00000483506 PROCRQ9UNN8 238 aa16.06■□□□□ 0.16
HDAC6-225ENST00000483506 GMNCA6NCL1 334 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 SULT2B1O00204 365 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 TPST1O60507 370 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 SMNDC1O75940 238 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC6-225ENST00000483506 PRKD3O94806 890 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 DMTNQ08495 405 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 RABL3Q5HYI8 236 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 ABLIM2Q6H8Q1 611 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 C6orf89Q6UWU4 347 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 MTDHQ86UE4 582 aaKnown RBP16.05■□□□□ 0.16
HDAC6-225ENST00000483506 ARMC8Q8IUR7 673 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 LSMEM1Q8N8F7 131 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 C3orf49Q96BT1 292 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 DDIT4LQ96D03 193 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 PSD2Q9BQI7 771 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 OR11A1Q9GZK7 315 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 MCCC2Q9HCC0 563 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 GID8Q9NWU2 228 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 ELOVL5Q9NYP7 299 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 CRIM1Q9NZV1 1036 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 KLHL9Q9P2J3 617 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 CLEC4AQ9UMR7 237 aa16.05■□□□□ 0.16
HDAC6-225ENST00000483506 CSMD1Q96PZ7 3565 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms