RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 LINC01387J3KSC0 135 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 ADRB1P08588 477 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 SLC35G4P0C7Q5 338 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 PAICSP22234 425 aaKnown RBP13.22□□□□□ -0.29
COL9A2-207ENST00000482722 ARHGDIBP52566 201 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 DUSP2Q05923 314 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 VITQ6UXI7 678 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 UBE3DQ7Z6J8 389 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 SPICQ8N5J4 248 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 FAM98AQ8NCA5 519 aaKnown RBP13.22□□□□□ -0.29
COL9A2-207ENST00000482722 FAM71CQ8NEG0 241 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 PIGXQ8TBF5 258 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 PHOSPHO2Q8TCD6 241 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 HCAR1Q9BXC0 346 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 NANSQ9NR45 359 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 GPR34Q9UPC5 381 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 OR2M5A3KFT3 312 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 IGLON5A6NGN9 336 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 GSTZ1O43708 216 aaPredicted RBP13.22□□□□□ -0.29
COL9A2-207ENST00000482722 GCGRP47871 477 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 CLDN2P57739 230 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 RAP2BP61225 183 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 SEC61A1P61619 476 aaKnown RBP13.22□□□□□ -0.29
COL9A2-207ENST00000482722 GNA13Q14344 377 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 HNRNPA1L2Q32P51 320 aaKnown RBP13.22□□□□□ -0.29
COL9A2-207ENST00000482722 PARM1Q6UWI2 310 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 PXKQ7Z7A4 578 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 MEIOBQ8N635 442 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 LINC01555Q8NAE3 123 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 OR5K2Q8NHB8 316 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 DOK4Q8TEW6 326 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 IFT27Q9BW83 186 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 TEX12Q9BXU0 123 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 ARL6Q9H0F7 186 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 ZNF275Q9NSD4 429 aaPredicted RBP13.22□□□□□ -0.29
COL9A2-207ENST00000482722 PCDHGA9Q9Y5G4 932 aaKnown RBP13.22□□□□□ -0.29
COL9A2-207ENST00000482722 C5orf67F2Z3F1 127 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 VEGFDO43915 354 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 GABRA1P14867 456 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 ANXA7P20073 488 aaKnown RBP13.22□□□□□ -0.29
COL9A2-207ENST00000482722 CALCRP30988 508 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 DEFA5Q01523 94 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 KRT33BQ14525 404 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 TRAM2Q15035 370 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 ACSM3Q53FZ2 586 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 C2orf27AQ580R0 203 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 B3GNTL1Q67FW5 361 aaPredicted RBP13.22□□□□□ -0.29
COL9A2-207ENST00000482722 OR4C11Q6IEV9 310 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 LINGO2Q7L985 606 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 PDZD9Q8IXQ8 264 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 GANCQ8TET4 914 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 LRRC46Q96FV0 321 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 ENKD1Q9H0I2 346 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 RHBGQ9H310 441 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 IL20Q9NYY1 176 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 KCNK6Q9Y257 313 aa13.22□□□□□ -0.29
COL9A2-207ENST00000482722 ABCD4O14678 606 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 MAGEB4O15481 346 aaPredicted RBP13.21□□□□□ -0.29
COL9A2-207ENST00000482722 ERI3O43414 337 aaKnown RBP13.21□□□□□ -0.29
COL9A2-207ENST00000482722 PLPP2O43688 288 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 FCMRO60667 390 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 SDC3O75056 442 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 GJA4P35212 333 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 ELAVL3Q14576 367 aaKnown RBP13.21□□□□□ -0.29
COL9A2-207ENST00000482722 TMEM31Q5JXX7 168 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 GLDNQ6ZMI3 551 aaPredicted RBP13.21□□□□□ -0.29
COL9A2-207ENST00000482722 ZNF793Q6ZN11 406 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 ERN2Q76MJ5 926 aaKnown RBP13.21□□□□□ -0.29
COL9A2-207ENST00000482722 ZDHHC1Q8WTX9 485 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 LINC00615Q96LM1 132 aaPredicted RBP13.21□□□□□ -0.29
COL9A2-207ENST00000482722 C12orf57Q99622 126 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 TMPRSS13Q9BYE2 586 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 OR51V1Q9H2C8 321 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 SLC35C2Q9NQQ7 365 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 EXOSC3Q9NQT5 275 aaKnown RBP13.21□□□□□ -0.29
COL9A2-207ENST00000482722 MED17Q9NVC6 651 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 ZMIZ1Q9ULJ6 1067 aa13.21□□□□□ -0.29
COL9A2-207ENST00000482722 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.21□□□□□ -0.3
COL9A2-207ENST00000482722 THY1P04216 161 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 EPXP11678 715 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 MAOBP27338 520 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 P2RY2P41231 377 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 GK2Q14410 553 aaPredicted RBP13.21□□□□□ -0.3
COL9A2-207ENST00000482722 FAM69AQ5T7M9 428 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 FAAP20Q6NZ36 180 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 APOOLQ6UXV4 268 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 ZNF620Q6ZNG0 422 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 PPP1R16AQ96I34 528 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 NOX3Q9HBY0 568 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 NPFFR2Q9Y5X5 522 aa13.21□□□□□ -0.3
COL9A2-207ENST00000482722 SNRNP200O75643 2136 aaKnown RBP13.21□□□□□ -0.3
COL9A2-207ENST00000482722 KIAA1549LQ6ZVL6 1849 aa13.2□□□□□ -0.3
COL9A2-207ENST00000482722 ATG2AQ2TAZ0 1938 aa13.2□□□□□ -0.3
COL9A2-207ENST00000482722 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.2□□□□□ -0.3
COL9A2-207ENST00000482722 EDDM13A0A1B0GTR0 161 aa13.2□□□□□ -0.3
COL9A2-207ENST00000482722 J3QLW9 94 aa13.2□□□□□ -0.3
COL9A2-207ENST00000482722 FGF19O95750 216 aa13.2□□□□□ -0.3
COL9A2-207ENST00000482722 IFNGR1P15260 489 aa13.2□□□□□ -0.3
COL9A2-207ENST00000482722 PPP3CBP16298 524 aa13.2□□□□□ -0.3
COL9A2-207ENST00000482722 ZNF19P17023 458 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms