RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 OR5B2Q96R09 309 aa18.75■□□□□ 0.59
SEC13-217ENST00000482647 RSPO3Q9BXY4 272 aaPredicted RBP18.75■□□□□ 0.59
SEC13-217ENST00000482647 HEATR5AQ86XA9 2040 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 ZNF208O43345 1280 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 C8BP07358 591 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 CCNA2P20248 432 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 CXCR1P25024 350 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 GRNP28799 593 aaKnown RBP18.74■□□□□ 0.59
SEC13-217ENST00000482647 AGFG1P52594 562 aaKnown RBP18.74■□□□□ 0.59
SEC13-217ENST00000482647 RAC3P60763 192 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 HOXC5Q00444 222 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 GLIPR1L2Q4G1C9 344 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 FAM91A1Q658Y4 838 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 GTF2IRD2BQ6EKJ0 949 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 GTF2IRD2Q86UP8 949 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 RASSF5Q8WWW0 418 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 COQ10BQ9H8M1 238 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 TAGLN3Q9UI15 199 aa18.74■□□□□ 0.59
SEC13-217ENST00000482647 A0A1W2PNR3 127 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 ELOVL7A1L3X0 281 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 AQP8O94778 261 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 IFNA14P01570 189 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 COL8A1P27658 744 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 SLC7A2P52569 658 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 PSME3P61289 254 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 CSNK2A1P68400 391 aaPredicted RBP18.73■□□□□ 0.59
SEC13-217ENST00000482647 LIPEQ05469 1076 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 DUSP7Q16829 419 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 TMPPEQ6ZT21 453 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 COMTD1Q86VU5 262 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 TAMM41Q96BW9 452 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 DDIT4LQ96D03 193 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 SRXN1Q9BYN0 137 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 TRIM2Q9C040 744 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 GLRX2Q9NS18 164 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 RPS6KB2Q9UBS0 482 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 HDGFL3Q9Y3E1 203 aa18.73■□□□□ 0.59
SEC13-217ENST00000482647 A0A1W2PNV4 684 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 SULT2B1O00204 365 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 SYT5O00445 386 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 LGI1O95970 557 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 PLGP00747 810 aaPredicted RBP18.72■□□□□ 0.59
SEC13-217ENST00000482647 OPN1SWP03999 348 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 CPA2P48052 419 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 KCNJ5P48544 419 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 RGS8P57771 180 aaPredicted RBP18.72■□□□□ 0.59
SEC13-217ENST00000482647 NCALDP61601 193 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 ZNF239Q16600 458 aaKnown RBP18.72■□□□□ 0.59
SEC13-217ENST00000482647 MICU2Q8IYU8 434 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 LSMEM1Q8N8F7 131 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 CNEP1R1Q8N9A8 125 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 RELL2Q8NC24 303 aaPredicted RBP18.72■□□□□ 0.59
SEC13-217ENST00000482647 OR52E4Q8NGH9 312 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 ROBO4Q8WZ75 1007 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 LRRC46Q96FV0 321 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 ZNF559Q9BR84 538 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 OR11A1Q9GZK7 315 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 PIGMQ9H3S5 423 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 TESQ9UGI8 421 aaKnown RBP18.72■□□□□ 0.59
SEC13-217ENST00000482647 USP22Q9UPT9 525 aa18.72■□□□□ 0.59
SEC13-217ENST00000482647 SETXQ7Z333 2677 aaKnown RBP18.72■□□□□ 0.59
SEC13-217ENST00000482647 TMEM72A0PK05 275 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 TNFSF13O75888 250 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 DIO1P49895 249 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 MNAT1P51948 309 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 TFF3Q07654 80 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 MYBPHQ13203 477 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 KRT72Q14CN4 511 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 RNPS1Q15287 305 aaKnown RBP18.71■□□□□ 0.59
SEC13-217ENST00000482647 RANBP3LQ86VV4 465 aaPredicted RBP18.71■□□□□ 0.59
SEC13-217ENST00000482647 MCEMP1Q8IX19 187 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 FITM2Q8N6M3 262 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 C3orf49Q96BT1 292 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 GMPPAQ96IJ6 420 aaPredicted RBP18.71■□□□□ 0.59
SEC13-217ENST00000482647 TMEM27Q9HBJ8 222 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 SPAG4Q9NPE6 437 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 ARL8BQ9NVJ2 186 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 TRAPPC4Q9Y296 219 aa18.71■□□□□ 0.59
SEC13-217ENST00000482647 EEF1E1-BLOC1S5C9J1V9 151 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 C19orf84I3L1E1 186 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 NME4O00746 187 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 EEF1E1O43324 174 aaKnown RBP18.7■□□□□ 0.58
SEC13-217ENST00000482647 PRKD3O94806 890 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 PMS2P2O95744 297 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 FESP07332 822 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 CD247P20963 164 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 ENPP1P22413 925 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 KIR2DL2P43627 348 aaPredicted RBP18.7■□□□□ 0.58
SEC13-217ENST00000482647 ASCL1P50553 236 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 CRYBA2P53672 197 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 HIST2H2BCQ6DN03 193 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 FCRLAQ7L513 359 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 FAM214BQ7L5A3 538 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 SLC43A2Q8N370 569 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 GPR32P1Q8NGA4 272 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 DNAJA4Q8WW22 397 aaPredicted RBP18.7■□□□□ 0.58
SEC13-217ENST00000482647 ARL5BQ96KC2 179 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 ARHGDIGQ99819 225 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 POTEKPQ9BYX7 375 aa18.7■□□□□ 0.58
SEC13-217ENST00000482647 ALG2Q9H553 416 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms