RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 SLC37A1P57057 533 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 NSDHLQ15738 373 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 CD226Q15762 336 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 NXNL2Q5VZ03 156 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 CD200R1LQ6Q8B3 271 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 CBLN3Q6UW01 205 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 APOOLQ6UXV4 268 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 ZNF620Q6ZNG0 422 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 TOR1AIP2Q8NFQ8 470 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 OR6F1Q8NGZ6 308 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 OR51A7Q8NH64 312 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 TMEM239Q8WW34 195 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 ATOH1Q92858 354 aaPredicted RBP13.28□□□□□ -0.28
CHD3-211ENST00000481999 KIAA1143Q96AT1 154 aaPredicted RBP13.28□□□□□ -0.28
CHD3-211ENST00000481999 CD180Q99467 661 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 NDC1Q9BTX1 674 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 SLC22A4Q9H015 551 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 MED20Q9H944 212 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 Q9N2J8 555 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 SLC22A11Q9NSA0 550 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 TOR4AQ9NXH8 423 aa13.28□□□□□ -0.28
CHD3-211ENST00000481999 KIF26BQ2KJY2 2108 aa13.27□□□□□ -0.28
CHD3-211ENST00000481999 TMCC2O75069 709 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 SLC1A3P43003 542 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 CCL7P80098 99 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 DSG2Q14126 1118 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 ARHGAP40Q5TG30 622 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 AADACL4Q5VUY2 407 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 KANSL1Q7Z3B3 1105 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 TM9SF2Q99805 663 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 COQ7Q99807 217 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 ERVMER34-1Q9H9K5 563 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 APMAPQ9HDC9 416 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 TRDV1A0A1B0GX56 115 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 SEC14L5O43304 696 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 WISP1O95388 367 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 DRD5P21918 477 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 GCGRP47871 477 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 CCDC92Q53HC0 331 aaPredicted RBP13.27□□□□□ -0.29
CHD3-211ENST00000481999 KIRREL2Q6UWL6 708 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 ZNF485Q8NCK3 441 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 SLC2A12Q8TD20 617 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 HCAR1Q9BXC0 346 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 VN1R1Q9GZP7 353 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 AKIRIN1Q9H9L7 192 aaPredicted RBP13.27□□□□□ -0.29
CHD3-211ENST00000481999 ZNF304Q9HCX3 659 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 IL20Q9NYY1 176 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 ZNF223Q9UK11 482 aaPredicted RBP13.27□□□□□ -0.29
CHD3-211ENST00000481999 CLCA3PQ9Y6N3 262 aa13.27□□□□□ -0.29
CHD3-211ENST00000481999 A0A1B0GTQ1 180 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 M0R296 226 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 SURF4O15260 269 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 SAGP10523 405 aaPredicted RBP13.26□□□□□ -0.29
CHD3-211ENST00000481999 RPS5P46782 204 aaKnown RBP13.26□□□□□ -0.29
CHD3-211ENST00000481999 GPLD1P80108 840 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 FABP5Q01469 135 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 TAB1Q15750 504 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 CAPSLQ8WWF8 208 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 NACC2Q96BF6 587 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 OR6C1Q96RD1 312 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 OR52D1Q9H346 318 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 SIDT1Q9NXL6 827 aaKnown RBP13.26□□□□□ -0.29
CHD3-211ENST00000481999 TNRC6BQ9UPQ9 1833 aaKnown RBP13.26□□□□□ -0.29
CHD3-211ENST00000481999 IGKV3D-11A0A0A0MRZ8 115 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 NPIPB9F8W1W9 429 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 POLR1CO15160 346 aaPredicted RBP13.26□□□□□ -0.29
CHD3-211ENST00000481999 LAMTOR5O43504 91 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 AKAP8O43823 692 aaKnown RBP13.26□□□□□ -0.29
CHD3-211ENST00000481999 DDAH2O95865 285 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 TRAPPC2P0DI81 140 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 TRAPPC2BP0DI82 140 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 FBLP22087 321 aaKnown RBP13.26□□□□□ -0.29
CHD3-211ENST00000481999 PPP3R1P63098 170 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 NDUFA5Q16718 116 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 ALG10BQ5I7T1 473 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 ATAD3CQ5T2N8 411 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 LRRC17Q8N6Y2 441 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 SYT14Q8NB59 555 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 SMAP2Q8WU79 429 aaPredicted RBP13.26□□□□□ -0.29
CHD3-211ENST00000481999 BPIFA2Q96DR5 249 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 ADOQ96SZ5 270 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 NUDT9Q9BW91 350 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 GMEB2Q9UKD1 530 aa13.26□□□□□ -0.29
CHD3-211ENST00000481999 CNTRLQ7Z7A1 2325 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 A0A0B4J2E0 115 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 LINC00854A0A1B0GVQ3 168 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 A0A1B0GX12 115 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 CSF3P09919 207 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 GAAP10253 952 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 CCR4P51679 360 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 DAB2P98082 770 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 SF3B4Q15427 424 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHD3-211ENST00000481999 PGGHGQ32M88 737 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 TCEAL6Q6IPX3 200 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 LHFPL3Q86UP9 236 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 GHDCQ8N2G8 530 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 KLHL36Q8N4N3 616 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 OR4F15Q8NGB8 312 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 TCEAL3Q969E4 200 aa13.25□□□□□ -0.29
CHD3-211ENST00000481999 OR2B2Q9GZK3 357 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms