RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 PLPPR2Q96GM1 343 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 PSD2Q9BQI7 771 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 NAA11Q9BSU3 229 aaPredicted RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 BCO1Q9HAY6 547 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 SLCO1B3Q9NPD5 702 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 CCDC167Q9P0B6 97 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 TMED7Q9Y3B3 224 aa13.64□□□□□ -0.23
CDK9-203ENST00000480353 PRRC2AP48634 2157 aaKnown RBP13.64□□□□□ -0.23
CDK9-203ENST00000480353 HRNRQ86YZ3 2850 aaPredicted RBP13.63□□□□□ -0.23
CDK9-203ENST00000480353 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.63□□□□□ -0.23
CDK9-203ENST00000480353 ZNF724A8MTY0 619 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 NR5A2O00482 541 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 AP3D1O14617 1153 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 BCAS1O75363 584 aaPredicted RBP13.63□□□□□ -0.23
CDK9-203ENST00000480353 PMS2P2O95744 297 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 CD53P19397 219 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 CXCR1P25024 350 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 TACR3P29371 465 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 SLC1A3P43003 542 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 AQP5P55064 265 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 RIPPLY3P57055 190 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 ITGADQ13349 1161 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 P2RY6Q15077 328 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 STK11Q15831 433 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 ZSWIM7Q19AV6 140 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 TTMPQ5BVD1 217 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 SFRP5Q5T4F7 317 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 SLC2A7Q6PXP3 512 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 BHLHA15Q7RTS1 189 aaPredicted RBP13.63□□□□□ -0.23
CDK9-203ENST00000480353 CADM2Q8N3J6 435 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 AURKBQ96GD4 344 aaPredicted RBP13.63□□□□□ -0.23
CDK9-203ENST00000480353 ZNF300Q96RE9 604 aaPredicted RBP13.63□□□□□ -0.23
CDK9-203ENST00000480353 USB1Q9BQ65 265 aaKnown RBP13.63□□□□□ -0.23
CDK9-203ENST00000480353 CCDC28BQ9BUN5 200 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 TMEM181Q9P2C4 612 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 NOSIPQ9Y314 301 aaKnown RBP13.63□□□□□ -0.23
CDK9-203ENST00000480353 CELSR1Q9NYQ6 3014 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 DSCAMO60469 2012 aa13.63□□□□□ -0.23
CDK9-203ENST00000480353 A0A0G2JPF8 293 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 A0A1W2PPR1 153 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 HNRNPCL2B2RXH8 293 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 HNRNPCL3B7ZW38 293 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 CLIC1O00299 241 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 GPR171O14626 319 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 SIAH2O43255 324 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 EIF1BO60739 113 aaKnown RBP13.62□□□□□ -0.23
CDK9-203ENST00000480353 HNRNPCL1O60812 293 aaKnown RBP13.62□□□□□ -0.23
CDK9-203ENST00000480353 HNRNPCL4P0DMR1 293 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 RPS4Y1P22090 263 aaKnown RBP13.62□□□□□ -0.23
CDK9-203ENST00000480353 OR3A2P47893 321 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 IDH3AP50213 366 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 MAP2K6P52564 334 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 SLC35A1P78382 337 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 NKX6-1P78426 367 aaPredicted RBP13.62□□□□□ -0.23
CDK9-203ENST00000480353 EPS8Q12929 822 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 FADDQ13158 208 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 TSC22D1Q15714 1073 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 GTDC1Q4AE62 458 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 AP1ARQ63HQ0 302 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 ZNF704Q6ZNC4 412 aaPredicted RBP13.62□□□□□ -0.23
CDK9-203ENST00000480353 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.62□□□□□ -0.23
CDK9-203ENST00000480353 VRK2Q86Y07 508 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 ADGRG3Q86Y34 549 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 SLC38A5Q8WUX1 472 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 HSD17B8Q92506 261 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 MUCL1Q96DR8 90 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 TMEM19Q96HH6 336 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 EBF4Q9BQW3 602 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 OR11A1Q9GZK7 315 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 ESRP2Q9H6T0 727 aaKnown RBP13.62□□□□□ -0.23
CDK9-203ENST00000480353 SLC6A13Q9NSD5 602 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 ZNF443Q9Y2A4 671 aaPredicted RBP13.62□□□□□ -0.23
CDK9-203ENST00000480353 IFT52Q9Y366 437 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 PCDHB14Q9Y5E9 798 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 FREM1Q5H8C1 2179 aa13.62□□□□□ -0.23
CDK9-203ENST00000480353 CIB4A0PJX0 185 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 TMEM72A0PK05 275 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 ZNF208O43345 1280 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 DNPH1O43598 174 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 GCM2O75603 506 aaPredicted RBP13.61□□□□□ -0.23
CDK9-203ENST00000480353 LYZL6O75951 148 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 THBDP07204 575 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 GKN3PP0CG01 181 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 PPIBP23284 216 aaKnown RBP13.61□□□□□ -0.23
CDK9-203ENST00000480353 ADAM8P78325 824 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 FOXD4Q12950 439 aaPredicted RBP13.61□□□□□ -0.23
CDK9-203ENST00000480353 RGNQ15493 299 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 AGKQ53H12 422 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 ZNF311Q5JNZ3 666 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 RPS26P11Q5JNZ5 115 aaPredicted RBP13.61□□□□□ -0.23
CDK9-203ENST00000480353 SHEQ5VZ18 495 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 WBP2NLQ6ICG8 309 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 ZNF836Q6ZNA1 936 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 Q6ZT83 130 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 GABRG1Q8N1C3 465 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 GTF2H4Q92759 462 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 APH1AQ96BI3 265 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 SPDL1Q96EA4 605 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 ARL5BQ96KC2 179 aa13.61□□□□□ -0.23
CDK9-203ENST00000480353 HS3ST6Q96QI5 342 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms