RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TPST2O60704 377 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 NCK1P16333 377 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 TCN1P20061 433 aaPredicted RBP17.73■□□□□ 0.43
LIME1-205ENST00000480139 NUP107P57740 925 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 ADORA2A-AS1P86434 159 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 NPTX1Q15818 432 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 TMEM176BQ3YBM2 270 aaPredicted RBP17.73■□□□□ 0.43
LIME1-205ENST00000480139 DNAL1Q4LDG9 190 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 SWT1Q5T5J6 900 aaKnown RBP17.73■□□□□ 0.43
LIME1-205ENST00000480139 RIPPLY2Q5TAB7 128 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 HBMQ6B0K9 141 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 ZNF613Q6PF04 617 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 ULK3Q6PHR2 472 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 MYO7BQ6PIF6 2116 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 POMZP3Q6PJE2 187 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 SEM1Q6ZVN7 128 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 OR4D11Q8NGI4 311 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 OR10D3Q8NH80 312 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 RND1Q92730 232 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 SLC7A6OSQ96CW6 309 aaPredicted RBP17.73■□□□□ 0.43
LIME1-205ENST00000480139 POLR2J2Q9GZM3 115 aaKnown RBP17.73■□□□□ 0.43
LIME1-205ENST00000480139 POLR2J3Q9H1A7 115 aaKnown RBP17.73■□□□□ 0.43
LIME1-205ENST00000480139 MUC13Q9H3R2 512 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 COQ10BQ9H8M1 238 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 TMEM27Q9HBJ8 222 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 RPS6KA6Q9UK32 745 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 SH3GLB1Q9Y371 365 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 SNX13Q9Y5W8 968 aa17.73■□□□□ 0.43
LIME1-205ENST00000480139 KIAA1549Q9HCM3 1950 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 A0A0B4J2E0 115 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 A0A1B0GWA3 101 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 A0A1B0GX12 115 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 KDM4EB2RXH2 506 aaPredicted RBP17.72■□□□□ 0.43
LIME1-205ENST00000480139 ATP5HO75947 161 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 SERPINA1P01009 418 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 OPN1LWP04000 364 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 PNMTP11086 282 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 AGAP20933 346 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 CXCR1P25024 350 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 SLC7A1P30825 629 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 CEACAM8P31997 349 aaPredicted RBP17.72■□□□□ 0.43
LIME1-205ENST00000480139 EIF1AXP47813 144 aaKnown RBP17.72■□□□□ 0.43
LIME1-205ENST00000480139 SMSP52788 366 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 PMPCAQ10713 525 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 OR1Q1Q15612 314 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 CARM1Q86X55 608 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 ATP6V1C2Q8NEY4 427 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 VANGL1Q8TAA9 524 aaPredicted RBP17.72■□□□□ 0.43
LIME1-205ENST00000480139 SSC4DQ8WTU2 575 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 CPNE4Q96A23 557 aaPredicted RBP17.72■□□□□ 0.43
LIME1-205ENST00000480139 DDIT4LQ96D03 193 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 ZFP3Q96NJ6 502 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 MCHR1Q99705 422 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 TM9SF2Q99805 663 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 TIGARQ9NQ88 270 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 DCAF13Q9NV06 445 aaKnown RBP17.72■□□□□ 0.43
LIME1-205ENST00000480139 SAMD4AQ9UPU9 718 aaKnown RBP17.72■□□□□ 0.43
LIME1-205ENST00000480139 HDGFL3Q9Y3E1 203 aa17.72■□□□□ 0.43
LIME1-205ENST00000480139 DOCK7Q96N67 2140 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 DOPEY1Q5JWR5 2465 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 TMEM72A0PK05 275 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 SLC22A20A6NK97 555 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 ARPC2O15144 300 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 GYG2O15488 501 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 FCGR2AP12318 317 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 CARD18P57730 90 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 CBX1P83916 185 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 SGCBQ16585 318 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 ALG10BQ5I7T1 473 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 RBM45Q8IUH3 476 aaKnown RBP17.71■□□□□ 0.43
LIME1-205ENST00000480139 OSTF1Q92882 214 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 SLC38A4Q969I6 547 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 SLC47A1Q96FL8 570 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 ZNF845Q96IR2 970 aaPredicted RBP17.71■□□□□ 0.43
LIME1-205ENST00000480139 TPD52L3Q96J77 140 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 OR5B2Q96R09 309 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 BTBD10Q9BSF8 475 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 LRRK2Q5S007 2527 aa17.71■□□□□ 0.43
LIME1-205ENST00000480139 DIDO1Q9BTC0 2240 aaKnown RBP17.71■□□□□ 0.43
LIME1-205ENST00000480139 HSPB2A8KAH6 182 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 A8MVM7 634 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 DNPH1O43598 174 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 CXCL13O43927 109 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 ZG16O60844 167 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 TOXO94900 526 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 PMS2P2O95744 297 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 ZNF682O95780 498 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 RASSF2P50749 326 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 RAC3P60763 192 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 CSNK2A1P68400 391 aaPredicted RBP17.7■□□□□ 0.42
LIME1-205ENST00000480139 PON3Q15166 354 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 HSPB2Q16082 182 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 ENTPD8Q5MY95 495 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 TMPPEQ6ZT21 453 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 NCCRP1Q6ZVX7 275 aaPredicted RBP17.7■□□□□ 0.42
LIME1-205ENST00000480139 ZNF808Q8N4W9 903 aaPredicted RBP17.7■□□□□ 0.42
LIME1-205ENST00000480139 STK35Q8TDR2 534 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 ADAMTS16Q8TE57 1224 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 GEMIN6Q8WXD5 167 aaKnown RBP17.7■□□□□ 0.42
LIME1-205ENST00000480139 PRR14Q9BWN1 585 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms