RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PRRC2AP48634 2157 aaKnown RBP3.15□□□□□ -1.9
CDC42BPA-212ENST00000478573 TNRC6BQ9UPQ9 1833 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 ARHGEF35A5YM69 484 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 MFSD2BA6NFX1 497 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 K7ERI5 159 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 TM9SF1O15321 606 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 RAMP1O60894 148 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 SDC3O75056 442 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLITRK3O94933 977 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR4F21O95013 312 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 MFN2O95140 757 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 IGHG3P01860 377 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 MT-ND1P03886 318 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 PAICSP22234 425 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 HTR5AP47898 357 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 RAG2P55895 527 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZNF33BQ06732 778 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 LAMTOR4Q0VGL1 99 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 EIF2B1Q14232 305 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 TMEM44Q2T9K0 475 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 C14orf28Q4W4Y0 310 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 CLLU1OSQ5K130 101 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 SEL1L2Q5TEA6 688 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 FAM219BQ5XKK7 198 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 TWF2Q6IBS0 349 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 LPCAT2Q7L5N7 544 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 TSEN54Q7Z6J9 526 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 TMCO2Q7Z6W1 182 aaPredicted RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZBTB8OSQ8IWT0 167 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 EFCAB13Q8IY85 973 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 CENPLQ8N0S6 344 aaPredicted RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC39A11Q8N1S5 342 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 FGFRL1Q8N441 504 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR5AU1Q8NGC0 362 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR52J3Q8NH60 311 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 RASL10AQ92737 203 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 KIFAP3Q92845 792 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 C11orf24Q96F05 449 aaPredicted RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 RBM18Q96H35 190 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZNF414Q96IQ9 312 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 CASD1Q96PB1 797 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 VPS35Q96QK1 796 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZBP1Q9H171 429 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 POLR3FQ9H1D9 316 aaPredicted RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 ADGRL4Q9HBW9 690 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 DCAF13Q9NV06 445 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 DUS2Q9NX74 493 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 GALPQ9UBC7 116 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 SMC3Q9UQE7 1217 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 CHMP2BQ9UQN3 213 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 RNF24Q9Y225 148 aa3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 EIF3LQ9Y262 564 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 EXOSC1Q9Y3B2 195 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-212ENST00000478573 NUP205Q92621 2012 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 TRBV7-9A0A0J9YWB2 115 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 A0A1B0GTH9 108 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 TMEM150BA6NC51 233 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 ACOD1A6NK06 481 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 LRRC30A6NM36 301 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 WASHC1A8K0Z3 465 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 SHISA9B4DS77 424 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 H0YCG3 227 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 H3BQV1 296 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 MAPK13O15264 365 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 MBTPS2O43462 519 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 UQCRBP14927 111 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 TSPAN8P19075 237 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 GLRA2P23416 452 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 CALRP27797 417 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 ADSSP30520 456 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 ARL2P36404 184 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 LONP1P36776 959 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 CCT6AP40227 531 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 ACADVLP49748 655 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 ARHGDIAP52565 204 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 TRA2BP62995 288 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 NCBP1Q09161 790 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 PEX6Q13608 980 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 CYLC2Q14093 348 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 LINC01620Q4KN68 170 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 TCEAL5Q5H9L2 206 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 BEND6Q5SZJ8 279 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 CBLN3Q6UW01 205 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 TIPARPQ7Z3E1 657 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 ERASQ7Z444 233 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 CEACAM19Q7Z692 300 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 MTERF4Q7Z6M4 381 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 ARL6IP6Q8N6S5 226 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 SUMF1Q8NBK3 374 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 STKLD1Q8NE28 680 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR4Q3Q8NH05 313 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR2L2Q8NH16 312 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 DTNBP1Q96EV8 351 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 IFT74Q96LB3 600 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 FEM1AQ9BSK4 669 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 TBCDQ9BTW9 1192 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 TBC1D10AQ9BXI6 508 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 RIBC2Q9H4K1 309 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 PRR34Q9NV39 138 aa3.14□□□□□ -1.91
CDC42BPA-212ENST00000478573 SENP1Q9P0U3 644 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms