RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 HSPB2Q16082 182 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 DUSP7Q16829 419 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 ZSWIM7Q19AV6 140 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 LRRC23Q53EV4 343 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-222ENST00000478095 SYT14P1Q58G82 188 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 PDSS1Q5T2R2 415 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 INTS11Q5TA45 600 aaKnown RBP9.21□□□□□ -0.94
HDAC6-222ENST00000478095 HACD2Q6Y1H2 254 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 PATL1Q86TB9 770 aaKnown RBP9.21□□□□□ -0.94
HDAC6-222ENST00000478095 ADGRG3Q86Y34 549 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 SLC30A8Q8IWU4 369 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 MICU2Q8IYU8 434 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 FITM2Q8N6M3 262 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 ANKS4BQ8N8V4 417 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 GPR32P1Q8NGA4 272 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 SLC26A7Q8TE54 656 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 ROBO4Q8WZ75 1007 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 OR5B2Q96R09 309 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 UCN2Q96RP3 112 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 TM9SF2Q99805 663 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 HOPXQ9BPY8 73 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-222ENST00000478095 PRRG4Q9BZD6 226 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 OR11A1Q9GZK7 315 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 SERINC1Q9NRX5 453 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 CHRNA9Q9UGM1 479 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 TAGLN3Q9UI15 199 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 SLC13A4Q9UKG4 626 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 PACSIN3Q9UKS6 424 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 CLEC4AQ9UMR7 237 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 TMED7Q9Y3B3 224 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 DOPEY1Q5JWR5 2465 aa9.21□□□□□ -0.94
HDAC6-222ENST00000478095 DNAJC13O75165 2243 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 IGHV3-15A0A0B4J1V0 119 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 ELOVL7A1L3X0 281 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 ZC3H12DA2A288 527 aaKnown RBP9.2□□□□□ -0.94
HDAC6-222ENST00000478095 C19orf84I3L1E1 186 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 FAAHO00519 579 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 RCBTB2O95199 551 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 SYNGR4O95473 234 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 KLK2P20151 261 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 CD247P20963 164 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 HTR2AP28223 471 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 HTR3AP46098 478 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 POLR2HP52434 150 aaKnown RBP9.2□□□□□ -0.94
HDAC6-222ENST00000478095 DLX5P56178 289 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 RGS8P57771 180 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-222ENST00000478095 NCALDP61601 193 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 SIRPAP78324 504 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 BNIP2Q12982 314 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 ZNF239Q16600 458 aaKnown RBP9.2□□□□□ -0.94
HDAC6-222ENST00000478095 FAM91A1Q658Y4 838 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 WBP2NLQ6ICG8 309 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 ERICH5Q6P6B1 374 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 RNF148Q8N7C7 305 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 CNEP1R1Q8N9A8 125 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 RELL2Q8NC24 303 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-222ENST00000478095 LILRB4Q8NHJ6 448 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 VANGL1Q8TAA9 524 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-222ENST00000478095 BCAS4Q8TDM0 211 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 SLC25A43Q8WUT9 341 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-222ENST00000478095 C3orf49Q96BT1 292 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 ARL5BQ96KC2 179 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 RNF122Q9H9V4 155 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 SPAG4Q9NPE6 437 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 KLHL28Q9NXS3 571 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 ADA2Q9NZK5 511 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 MCTS1Q9ULC4 181 aaKnown RBP9.2□□□□□ -0.94
HDAC6-222ENST00000478095 ZNF175Q9Y473 711 aa9.2□□□□□ -0.94
HDAC6-222ENST00000478095 SPIN1Q9Y657 262 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-222ENST00000478095 A0A1B0GWA3 101 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 A0A1W2PNV4 684 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 EEF1E1-BLOC1S5C9J1V9 151 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 DVL2O14641 736 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 EEF1E1O43324 174 aaKnown RBP9.19□□□□□ -0.94
HDAC6-222ENST00000478095 TPST2O60704 377 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 FCGR2AP12318 317 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 NCK1P16333 377 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 TNFRSF1BP20333 461 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 PTNP21246 168 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 ENPP1P22413 925 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 CXCR1P25024 350 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 CTSSP25774 331 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 KCNJ5P48544 419 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 GSK3BP49841 420 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 DIO1P49895 249 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 MXRA7P84157 204 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 SLC25A3Q00325 362 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 MYBPHQ13203 477 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 VEZF1Q14119 521 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 VWA1Q6PCB0 445 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 CCDC80Q76M96 950 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 RBM45Q8IUH3 476 aaKnown RBP9.19□□□□□ -0.94
HDAC6-222ENST00000478095 BHLHE22Q8NFJ8 381 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-222ENST00000478095 OR52E4Q8NGH9 312 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 OR4D11Q8NGI4 311 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 OR6T1Q8NGN1 323 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 RNF217Q8TC41 542 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 ABHD3Q8WU67 409 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 SLC35B4Q969S0 331 aa9.19□□□□□ -0.94
HDAC6-222ENST00000478095 CPNE4Q96A23 557 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms