RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 C1orf229Q6ZS94 237 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 TUBA1AQ71U36 451 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 LINGO2Q7L985 606 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 SPATA19Q7Z5L4 167 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 MTERF4Q7Z6M4 381 aaKnown RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 MTDHQ86UE4 582 aaKnown RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 CLEC4FQ8N1N0 589 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 TMCO5AQ8N6Q1 288 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 ZIC4Q8N9L1 334 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 OR7A2PQ8NGA2 310 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 OR5D16Q8NGK9 328 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 FAM76AQ8TAV0 307 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 PPCDCQ96CD2 204 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 TRMOQ9BU70 441 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 CCDC106Q9BWC9 280 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 METTL17Q9H7H0 456 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 CTPS2Q9NRF8 586 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 DUSP22Q9NRW4 184 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 ZCCHC3Q9NUD5 404 aaKnown RBP8.48□□□□□ -1.05
COL4A5-204ENST00000477429 SH3BP4Q9P0V3 963 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 PMF1-BGLAPU3KQ54 211 aa8.48□□□□□ -1.05
COL4A5-204ENST00000477429 CLDN24A6NM45 220 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 FAM157AC9JC47 383 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 NR5A2O00482 541 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 ZNF264O43296 627 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 CYP7B1O75881 506 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 AVPP01185 164 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 CELA3BP08861 270 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 LAMP1P11279 417 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 UBL4AP11441 157 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 IMPDH2P12268 514 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 DDX5P17844 614 aaKnown RBP8.47□□□□□ -1.05
COL4A5-204ENST00000477429 CCNA2P20248 432 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 TAC1P20366 129 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 PRPH2P23942 346 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 GIFP27352 417 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 APEX1P27695 318 aaKnown RBP8.47□□□□□ -1.05
COL4A5-204ENST00000477429 PHBP35232 272 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 SERPINF1P36955 418 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 SERPINB9P50453 376 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 SLC16A1P53985 500 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 HGFACQ04756 655 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 MERTKQ12866 999 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 RIN1Q13671 783 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 PDK3Q15120 406 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-204ENST00000477429 C3orf33Q6P1S2 294 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 VHLLQ6RSH7 139 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 SLC46A3Q7Z3Q1 461 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 RELL1Q8IUW5 271 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 C17orf53Q8N3J3 647 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-204ENST00000477429 OR5AK3PQ8NH89 298 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 MZB1Q8WU39 189 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 ZG16BQ96DA0 208 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 CHMP6Q96FZ7 201 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 ZNF764Q96H86 408 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-204ENST00000477429 STACQ99469 402 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 SDF2Q99470 211 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 SAP130Q9H0E3 1048 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 RAB17Q9H0T7 212 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 PLK3Q9H4B4 646 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 CA10Q9NS85 328 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 ACSS1Q9NUB1 689 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-204ENST00000477429 ZNF180Q9UJW8 692 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 NFU1Q9UMS0 254 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 FLVCR1Q9Y5Y0 555 aa8.47□□□□□ -1.05
COL4A5-204ENST00000477429 ZC3H12DA2A288 527 aaKnown RBP8.46□□□□□ -1.06
COL4A5-204ENST00000477429 TMEM89A2RUT3 159 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 ZNF503-AS2A6NEH8 195 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 TMEM233B4DJY2 109 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 EIF4E2O60573 245 aaKnown RBP8.46□□□□□ -1.06
COL4A5-204ENST00000477429 MRPL33O75394 65 aaKnown RBP8.46□□□□□ -1.06
COL4A5-204ENST00000477429 SKAP2O75563 359 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-204ENST00000477429 UGT2B17O75795 530 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 C6orf47O95873 294 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 SNRPAP09012 282 aaKnown RBP8.46□□□□□ -1.06
COL4A5-204ENST00000477429 OR4A8P0C604 315 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 LINC00032P0C843 101 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 UBTFL6P0CB48 400 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-204ENST00000477429 TFPIP10646 304 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 BCKDHAP12694 445 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 DAOP14920 347 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 CDH2P19022 906 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-204ENST00000477429 ATP6V1C1P21283 382 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 H3F3AP84243 136 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 PDCD2Q16342 344 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-204ENST00000477429 LIPMQ5VYY2 423 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 ZCCHC12Q6PEW1 402 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 CASP12Q6UXS9 341 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 TIFABQ6ZNK6 161 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 FRMD7Q6ZUT3 714 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 ADGRG3Q86Y34 549 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 CDK20Q8IZL9 346 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 LINC01356Q8N9X3 169 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 TOR1AIP2Q8NFQ8 470 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 ZNF385AQ96PM9 386 aaKnown RBP8.46□□□□□ -1.06
COL4A5-204ENST00000477429 OR7D2Q96RA2 312 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 CCT7Q99832 543 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 ACTRT3Q9BYD9 372 aa8.46□□□□□ -1.06
COL4A5-204ENST00000477429 LAT2Q9GZY6 243 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms