RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ASB4Q9Y574 426 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SCN4AP35499 1836 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 SULT1C4O75897 302 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 NID1P14543 1247 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 FPR3P25089 353 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 UGT2B10P36537 528 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 NUP62P37198 522 aaPredicted RBP10.21□□□□□ -0.77
COL27A1-204ENST00000477421 CASP3P42574 277 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 PITPNBP48739 271 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 LAIR1Q6GTX8 287 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 MED25Q71SY5 747 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 OR2AJ1Q8NGZ0 328 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 AKAP1Q92667 903 aaKnown RBP eCLIP10.21□□□□□ -0.77
COL27A1-204ENST00000477421 Q96M85 177 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 TSSK2Q96PF2 358 aa10.21□□□□□ -0.77
COL27A1-204ENST00000477421 SIRT3Q9NTG7 399 aaPredicted RBP10.21□□□□□ -0.77
COL27A1-204ENST00000477421 PDCD11Q14690 1871 aaKnown RBP10.21□□□□□ -0.77
COL27A1-204ENST00000477421 A0A1B0GW55 424 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF726A6NNF4 738 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 DUX4L2P0CJ85 424 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 DUX4L3P0CJ86 424 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 DUX4L4P0CJ87 422 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 DUX4L5P0CJ88 424 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 DUX4L6P0CJ89 424 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 DUX4L7P0CJ90 424 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 UBL4AP11441 157 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 GIFP27352 417 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 CD6P30203 668 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 MRPS21P82921 87 aaKnown RBP10.21□□□□□ -0.78
COL27A1-204ENST00000477421 FABP5Q01469 135 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 AGAP7PQ5VUJ5 663 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 NXNL2Q5VZ03 156 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 OR13C5Q8NGS8 318 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 OR6N1Q8NGY5 312 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 OR2T4Q8NH00 348 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 SENP5Q96HI0 755 aaPredicted RBP10.21□□□□□ -0.78
COL27A1-204ENST00000477421 CRISPLD2Q9H0B8 497 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF576Q9H609 170 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 EXO5Q9H790 373 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 SDHAF3Q9NRP4 125 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 DUX4Q9UBX2 424 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 FBXL3Q9UKT7 428 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 RGPD3A6NKT7 1758 aaPredicted RBP10.21□□□□□ -0.78
COL27A1-204ENST00000477421 RGPD4Q7Z3J3 1758 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 A0A1W2PPL8 197 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 HTR3EA5X5Y0 456 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 P2RX6O15547 441 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 TRIM3O75382 744 aaPredicted RBP10.21□□□□□ -0.78
COL27A1-204ENST00000477421 HBQ1P09105 142 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 COL9A1P20849 921 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 SFTPDP35247 375 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 STARP49675 285 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 ACTA2P62736 377 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 ACTG2P63267 376 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 ARFRP1Q13795 201 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 KLHL26Q53HC5 615 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 FBXO42Q6P3S6 717 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF620Q6ZNG0 422 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 SLITRK4Q8IW52 837 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 GRPEL2Q8TAA5 225 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 DNAJA4Q8WW22 397 aaPredicted RBP10.21□□□□□ -0.78
COL27A1-204ENST00000477421 OR14A2Q96R54 314 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 DOK1Q99704 481 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 ORAI3Q9BRQ5 295 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 OR10A5Q9H207 317 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 NT5DC2Q9H857 520 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 FBXO8Q9NRD0 319 aa10.21□□□□□ -0.78
COL27A1-204ENST00000477421 IGHV3-20A0A0C4DH32 117 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 HSD11B1P28845 292 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 YPEL5P62699 121 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 HSF2Q03933 536 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 TCTE1Q5JU00 501 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 PRAMEF17Q5VTA0 474 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF322Q6U7Q0 402 aaPredicted RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ESPNLQ6ZVH7 1005 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 DPY19L4Q7Z388 723 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 RBM12BQ8IXT5 1001 aaKnown RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ARMC10Q8N2F6 343 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 FCAMRQ8WWV6 532 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 SLC35B4Q969S0 331 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ELSPBP1Q96BH3 223 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 RBP7Q96R05 134 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 TEAD3Q99594 435 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ATG5Q9H1Y0 275 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ISG20L2Q9H9L3 353 aaKnown RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 FOLH1BQ9HBA9 442 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ALKBH4Q9NXW9 302 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 OBP2AQ9NY56 170 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 FTSJ1Q9UET6 329 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 OSGIN1Q9UJX0 560 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 TBC1D24Q9ULP9 559 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 SLC17A4Q9Y2C5 497 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 FAM221BA6H8Z2 402 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 SLC16A7O60669 478 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ADAM23O75077 832 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 GTF2F2P13984 249 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 PCBP3P57721 371 aaKnown RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 BAK1Q16611 211 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 OCLNQ16625 522 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 PRSS53Q2L4Q9 553 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms