RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CNOT2Q9NZN8 540 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 TMEM181Q9P2C4 612 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ABCD2Q9UBJ2 740 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ANAPC7Q9UJX3 599 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 DNAJC12Q9UKB3 198 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PYCARDQ9ULZ3 195 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 MGAT4AQ9UM21 535 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 NDRG2Q9UN36 371 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 SLC22A13Q9Y226 551 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 KCNK6Q9Y257 313 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 WIF1Q9Y5W5 379 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 USH1CQ9Y6N9 552 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 MAP3K1Q13233 1512 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 A2MP01023 1474 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 FANCD2Q9BXW9 1451 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 CHD1O14646 1710 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 MROH7Q68CQ1 1323 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 SALL1Q9NSC2 1324 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 SPEF2Q9C093 1822 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 ZNF609O15014 1411 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 IGLV3-10A0A075B6K4 115 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 LOC102723996A0A087X1L8 192 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 SMIM31A0A1B0GVY4 71 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 A0A1B0GW15 77 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 A0A1W2PQF6 199 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 SERPINE3A8MV23 424 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 TMX2-CTNND1H3BSU7 103 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 SGK494L7N484 410 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 B4GALT5O43286 388 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 ZNF208O43345 1280 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 CSO75390 466 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 STX11O75558 287 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 UPK3AO75631 287 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 STBD1O95210 358 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 DUS4LO95620 317 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 EML2O95834 649 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 NDUFB10O96000 172 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 GSRP00390 522 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 OAS1P00973 400 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 IFNA4P05014 189 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 PCCAP05165 728 aaPredicted RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 PROS1P07225 676 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 RBP1P09455 135 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 SMIM10L1P0DMW3 83 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 IGHV4-38-2P0DP08 117 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 FOSL2P15408 326 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 UGT1A6P19224 532 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 ANXA7P20073 488 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 CD22P20273 847 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 ME2P23368 584 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 DNASE1P24855 282 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 ELAVL4P26378 380 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 DCKP27707 260 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 MARCKSP29966 332 aaPredicted RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 TIA1P31483 386 aaKnown RBP eCLIP2.19□□□□□ -2.06
XRN1-211ENST00000477237 CCR7P32248 378 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 CEACAM3P40198 252 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 CEACAM6P40199 344 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 ID1P41134 155 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 MAP3K8P41279 467 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 GRIA1P42261 906 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 MAGEA2P43356 314 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 MAGEA6P43360 314 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 YAP1P46937 504 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 OR3A3P47888 321 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 GABRA4P48169 554 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 SRP9P49458 86 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 MMP15P51511 669 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 TPMTP51580 245 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 PNLIPRP2P54317 469 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 FGF8P55075 233 aaPredicted RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 CDH13P55290 713 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 C21orf59P57076 290 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 NUTF2P61970 127 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 KCNJ2P63252 427 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 CCZ1BP86790 482 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 CCZ1P86791 482 aaPredicted RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 CNTN2Q02246 1040 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 BDH1Q02338 343 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 ZNF45Q02386 682 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 ILKQ13418 452 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 GRB7Q14451 532 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 TRAM2Q15035 370 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 TRIP13Q15645 432 aaPredicted RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 CHI3L2Q15782 390 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 TAZQ16635 292 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 LIN52Q52LA3 116 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 PAN3Q58A45 887 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 KHDRBS2Q5VWX1 349 aaKnown RBP2.19□□□□□ -2.06
XRN1-211ENST00000477237 FRG2Q64ET8 278 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 FAM91A1Q658Y4 838 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 REEP3Q6NUK4 255 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 RPL13AP3Q6NVV1 102 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 HSDL2Q6YN16 418 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 QSOX2Q6ZRP7 698 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 TMEM26Q6ZUK4 368 aa2.19□□□□□ -2.06
XRN1-211ENST00000477237 DPPA4Q7L190 304 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms