RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SULT2B1O00204 365 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 CYTIPO60759 359 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 FESP07332 822 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 YES1P07947 543 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 TFPIP10646 304 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 ACAA2P42765 397 aaKnown RBP18.83■□□□□ 0.6
LIME1-204ENST00000476183 SLC1A3P43003 542 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 TMEM201Q5SNT2 666 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 DLEU7Q6UYE1 221 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 TFAP2EQ6VUC0 442 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 STAC2Q6ZMT1 411 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 SLC43A2Q8N370 569 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 MED18Q9BUE0 208 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 RSPO3Q9BXY4 272 aaPredicted RBP18.83■□□□□ 0.6
LIME1-204ENST00000476183 BCO1Q9HAY6 547 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 GP6Q9HCN6 339 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 TMED7Q9Y3B3 224 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 SPIN1Q9Y657 262 aaPredicted RBP18.83■□□□□ 0.6
LIME1-204ENST00000476183 GMEB1Q9Y692 573 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 TMEM72A0PK05 275 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 TMEM247A6NEH6 219 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 CASKO14936 926 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 GOSR1O95249 250 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 THBS1P07996 1170 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 TACR3P29371 465 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 POLR2HP52434 150 aaKnown RBP18.82■□□□□ 0.6
LIME1-204ENST00000476183 RNF220Q5VTB9 566 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 PRAMEF8Q5VWM4 474 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 PRAMEF7Q5VXH5 474 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 FBXW10Q5XX13 1052 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 ZNF440Q8IYI8 595 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 ZNF300Q96RE9 604 aaPredicted RBP18.82■□□□□ 0.6
LIME1-204ENST00000476183 SIKE1Q9BRV8 207 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 ADAM19Q9H013 955 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 RABEP2Q9H5N1 569 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 PLEKHF2Q9H8W4 249 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 C6orf203Q9P0P8 240 aaPredicted RBP18.82■□□□□ 0.6
LIME1-204ENST00000476183 ST6GALNAC2Q9UJ37 374 aa18.82■□□□□ 0.6
LIME1-204ENST00000476183 DEFB108AA8MXU0 73 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 PGM3O95394 542 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 ARAFP10398 606 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 PRG2P13727 222 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 HTR3AP46098 478 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 IST1P53990 364 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 CSNK2A1P68400 391 aaPredicted RBP18.81■□□□□ 0.6
LIME1-204ENST00000476183 RASGEF1BQ0VAM2 473 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 LARS2Q15031 903 aaKnown RBP18.81■□□□□ 0.6
LIME1-204ENST00000476183 GCNT6Q5T4J0 391 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 BEND4Q6ZU67 534 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 RETREG3Q86VR2 466 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 NFKBIDQ8NI38 313 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 BBS10Q8TAM1 723 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 ZNF775Q96BV0 537 aaPredicted RBP18.81■□□□□ 0.6
LIME1-204ENST00000476183 ZC3HAV1LQ96H79 300 aaKnown RBP18.81■□□□□ 0.6
LIME1-204ENST00000476183 SPATA9Q9BWV2 254 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 KLHL9Q9P2J3 617 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 TRIM33Q9UPN9 1127 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 HDGFL3Q9Y3E1 203 aa18.81■□□□□ 0.6
LIME1-204ENST00000476183 ROS1P08922 2347 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 ITPR3Q14573 2671 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 ZC3H12DA2A288 527 aaKnown RBP18.8■□□□□ 0.6
LIME1-204ENST00000476183 ZNF814B7Z6K7 855 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 GCM2O75603 506 aaPredicted RBP18.8■□□□□ 0.6
LIME1-204ENST00000476183 PMS2P2O95744 297 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 THBDP07204 575 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 CRYGSP22914 178 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 PPIBP23284 216 aaKnown RBP18.8■□□□□ 0.6
LIME1-204ENST00000476183 EDNRAP25101 427 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 CLK1P49759 484 aaKnown RBP18.8■□□□□ 0.6
LIME1-204ENST00000476183 ABLIM2Q6H8Q1 611 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 CGB2Q6NT52 195 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 SERPINA11Q86U17 422 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 MTDHQ86UE4 582 aaKnown RBP18.8■□□□□ 0.6
LIME1-204ENST00000476183 STK32CQ86UX6 486 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 CPPED1Q9BRF8 314 aaPredicted RBP18.8■□□□□ 0.6
LIME1-204ENST00000476183 TMEM120AQ9BXJ8 343 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 FGFR1OP2Q9NVK5 253 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 ZNF226Q9NYT6 803 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.8■□□□□ 0.6
LIME1-204ENST00000476183 LEF1Q9UJU2 399 aaPredicted RBP18.8■□□□□ 0.6
LIME1-204ENST00000476183 ZNF232Q9UNY5 417 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 PLEKHA6Q9Y2H5 1048 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 IFT52Q9Y366 437 aa18.8■□□□□ 0.6
LIME1-204ENST00000476183 PRRC2AP48634 2157 aaKnown RBP18.8■□□□□ 0.6
LIME1-204ENST00000476183 C5orf58C9J3I9 102 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 ZNF208O43345 1280 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 FRS3O43559 492 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 IMPDH2P12268 514 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 UQCRBP14927 111 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 GPX2P18283 190 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 FKBP2P26885 142 aaKnown RBP18.79■□□□□ 0.6
LIME1-204ENST00000476183 SF3A3Q12874 501 aaKnown RBP eCLIP18.79■□□□□ 0.6
LIME1-204ENST00000476183 ADRM1Q16186 407 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 RUNDC3AQ59EK9 446 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 ZNF311Q5JNZ3 666 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 CXorf67Q86X51 503 aaPredicted RBP18.79■□□□□ 0.6
LIME1-204ENST00000476183 GABRG1Q8N1C3 465 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 DPP10Q8N608 796 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 NINJ1Q92982 152 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 TACO1Q9BSH4 297 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms