RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 SEMA4CQ9C0C4 833 aa16.73■□□□□ 0.27
SEC61A2-213ENST00000475268 BAIAP2Q9UQB8 552 aa16.73■□□□□ 0.27
SEC61A2-213ENST00000475268 TMEM129A0AVI4 362 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ALG1L2C9J202 215 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 WWP2O00308 870 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 SCO2O43819 266 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 CPNE3O75131 537 aaKnown RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 NDUFB2O95178 105 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 LIMS3P0CW19 117 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 LIMS4P0CW20 117 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 PEPDP12955 493 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 NRG3P56975 720 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 TUBA1BP68363 451 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 LIPKQ5VXJ0 399 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 TUBA1AQ71U36 451 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 MEPCEQ7L2J0 689 aaKnown RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 BPHLQ86WA6 291 aaPredicted RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 SLC37A3Q8NCC5 494 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 OR51G2Q8NGK0 314 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 OR5M3Q8NGP4 307 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 PTP4A1Q93096 173 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 C8orf44Q96CB5 159 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ERMAPQ96PL5 475 aaPredicted RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 SLC19A3Q9BZV2 496 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 EXOGQ9Y2C4 368 aaKnown RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 A0A1W2PQD3 144 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 CCL4P13236 92 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ZNF28P17035 718 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ZNF3P17036 446 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 HK1P19367 917 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 PAICSP22234 425 aaKnown RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 OPRL1P41146 370 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 SLC1A3P43003 542 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 SLC6A8P48029 635 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 SLC16A1P53985 500 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ZFP36L1Q07352 338 aaKnown RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ITGADQ13349 1161 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 TRA2AQ13595 282 aaKnown RBP eCLIP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 CRMP1Q14194 572 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ANGPT1Q15389 498 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ZNF528Q3MIS6 628 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 GXYLT1Q4G148 440 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ZNF362Q5T0B9 420 aaPredicted RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 C10orf53Q8N6V4 93 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 BMPERQ8N8U9 685 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 CYB561A3Q8NBI2 242 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 KBTBD8Q8NFY9 601 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 CCNL2Q96S94 520 aaPredicted RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 LPAR4Q99677 370 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 SLIRPQ9GZT3 109 aaKnown RBP16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 OR51V1Q9H2C8 321 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 TNFRSF10DQ9UBN6 386 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 ZNF337Q9Y3M9 751 aa16.72■□□□□ 0.27
SEC61A2-213ENST00000475268 A0A1B0GVG6 124 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 GPX5O75715 221 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 OR7A10O76100 309 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 LDOC1O95751 146 aaPredicted RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 NUDT14O95848 222 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 TACR3P29371 465 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 EVI2BP34910 448 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 GRK6P43250 576 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 LIMK1P53667 647 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 RPS7P62081 194 aaKnown RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 ZNF829Q3KNS6 432 aaPredicted RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 FAM69BQ5VUD6 431 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 ARHGAP11AQ6P4F7 1023 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 FAM199XQ6PEV8 388 aaPredicted RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 CPEB2Q7Z5Q1 589 aaKnown RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 SLC43A2Q8N370 569 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 SLC15A4Q8N697 577 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 SIRT6Q8N6T7 355 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 OR9Q1Q8NGQ5 310 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 TP53INP1Q96A56 240 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 SECISBP2Q96T21 854 aaKnown RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 WDR77Q9BQA1 342 aaPredicted RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 EXOSC4Q9NPD3 245 aaKnown RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 NPFFR2Q9Y5X5 522 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 SPIN1Q9Y657 262 aaPredicted RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 NCOR1O75376 2440 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 TRBV11-1A0A0K0K1C0 115 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 PNMA8CA0A1B0GUJ8 204 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 MCIDASD6RGH6 385 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 PSMA1P25786 263 aaKnown RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 RPL4P36578 427 aaKnown RBP16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 CD79BP40259 229 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 PHC2Q8IXK0 858 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 VMP1Q96GC9 406 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 TMEM43Q9BTV4 400 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 SLC26A1Q9H2B4 701 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 OCEL1Q9H607 264 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 RXFP3Q9NSD7 469 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 NDUFB11Q9NX14 153 aa16.71■□□□□ 0.27
SEC61A2-213ENST00000475268 OR6C70A6NIJ9 312 aa16.7■□□□□ 0.26
SEC61A2-213ENST00000475268 EIF4E2O60573 245 aaKnown RBP16.7■□□□□ 0.26
SEC61A2-213ENST00000475268 IFNGP01579 166 aa16.7■□□□□ 0.26
SEC61A2-213ENST00000475268 TSPAN19P0C672 248 aa16.7■□□□□ 0.26
SEC61A2-213ENST00000475268 CLUP10909 449 aa16.7■□□□□ 0.26
SEC61A2-213ENST00000475268 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.7■□□□□ 0.26
SEC61A2-213ENST00000475268 TOMM34Q15785 309 aaPredicted RBP16.7■□□□□ 0.26
SEC61A2-213ENST00000475268 POMZP3Q6PJE2 187 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms