RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SPATA21Q7Z572 469 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 NET1Q7Z628 596 aaPredicted RBP16.9■□□□□ 0.3
PTCD3-210ENST00000473829 ZZZ3Q8IYH5 903 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 HIPK4Q8NE63 616 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 LRRC46Q96FV0 321 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 ADAM19Q9H013 955 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 CACYBPQ9HB71 228 aaKnown RBP16.9■□□□□ 0.3
PTCD3-210ENST00000473829 TIGARQ9NQ88 270 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 MRGBPQ9NV56 204 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 KCNN3Q9UGI6 736 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 TACC2O95359 2948 aa16.9■□□□□ 0.3
PTCD3-210ENST00000473829 BBIP1A8MTZ0 92 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 GCM2O75603 506 aaPredicted RBP16.89■□□□□ 0.29
PTCD3-210ENST00000473829 TFPIP10646 304 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 CD8BP10966 210 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 SLC6A2P23975 617 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 ADSLP30566 484 aaPredicted RBP16.89■□□□□ 0.29
PTCD3-210ENST00000473829 PRKAR1BP31321 381 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 GZMMP51124 257 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 PCBP3P57721 371 aaKnown RBP16.89■□□□□ 0.29
PTCD3-210ENST00000473829 SORDQ00796 357 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 MAPRE2Q15555 327 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 COQ5Q5HYK3 327 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 NANOGP8Q6NSW7 305 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 TMPPEQ6ZT21 453 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 ZNF550Q7Z398 422 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 CADM2Q8N3J6 435 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 POU5F2Q8N7G0 328 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 ZNF610Q8N9Z0 462 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 OR6K3Q8NGY3 331 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 LRRC58Q96CX6 371 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 ELAC2Q9BQ52 826 aaKnown RBP16.89■□□□□ 0.29
PTCD3-210ENST00000473829 NANOGQ9H9S0 305 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 ING1Q9UK53 422 aaPredicted RBP16.89■□□□□ 0.29
PTCD3-210ENST00000473829 PROCRQ9UNN8 238 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 EMC9Q9Y3B6 208 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 SPIN1Q9Y657 262 aaPredicted RBP16.89■□□□□ 0.29
PTCD3-210ENST00000473829 MPDZO75970 2070 aa16.89■□□□□ 0.29
PTCD3-210ENST00000473829 ZC3H12DA2A288 527 aaKnown RBP16.88■□□□□ 0.29
PTCD3-210ENST00000473829 FESP07332 822 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 UQCRBP14927 111 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 DRD4P21917 467 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 CCKARP32238 428 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 LSP1P33241 339 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 HTR3AP46098 478 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 CTBP2P56545 445 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 DMTNQ08495 405 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 FAM27E3Q08E93 113 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 ZSWIM7Q19AV6 140 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 MMEL1Q495T6 779 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 DHRS4L2Q6PKH6 230 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 KRT73Q86Y46 540 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 C11orf65Q8NCR3 313 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 OR10A6Q8NH74 314 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 LINC01560Q8TB33 94 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 REXO5Q96IC2 774 aaKnown RBP16.88■□□□□ 0.29
PTCD3-210ENST00000473829 WFDC6Q9BQY6 131 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 ZNF559Q9BR84 538 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 FAM107BQ9H098 131 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 PIF1Q9H611 641 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 GLRX2Q9NS18 164 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 KLHL13Q9P2N7 655 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 ANGPT4Q9Y264 503 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 PDZD2O15018 2839 aa16.88■□□□□ 0.29
PTCD3-210ENST00000473829 SULT2B1O00204 365 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 DYNC1I1O14576 645 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 SLC22A2O15244 555 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 RBBP4Q09028 425 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 CYLC2Q14093 348 aaPredicted RBP16.87■□□□□ 0.29
PTCD3-210ENST00000473829 RNPS1Q15287 305 aaKnown RBP16.87■□□□□ 0.29
PTCD3-210ENST00000473829 WBP2NLQ6ICG8 309 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 NUFIP2Q7Z417 695 aaKnown RBP16.87■□□□□ 0.29
PTCD3-210ENST00000473829 KIF18BQ86Y91 864 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 TREML1Q86YW5 311 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 TUSC5Q8IXB3 177 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 C3orf49Q96BT1 292 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 RCN3Q96D15 328 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 PSD2Q9BQI7 771 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 ARMC7Q9H6L4 198 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 C12orf49Q9H741 205 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 MCCC2Q9HCC0 563 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 PLSCR4Q9NRQ2 329 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 USP22Q9UPT9 525 aa16.87■□□□□ 0.29
PTCD3-210ENST00000473829 HRNRQ86YZ3 2850 aaPredicted RBP16.87■□□□□ 0.29
PTCD3-210ENST00000473829 TUBAL3A6NHL2 446 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 ZNF814B7Z6K7 855 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 ZNF208O43345 1280 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 CYTIPO60759 359 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 PRKD3O94806 890 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 MFN2O95140 757 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 PMS2P2O95744 297 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 OPN1SWP03999 348 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 IMPDH2P12268 514 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 HTR2AP28223 471 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 PCGF2P35227 344 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 PEX19P40855 299 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 CSNK2A1P68400 391 aaPredicted RBP16.86■□□□□ 0.29
PTCD3-210ENST00000473829 BNIP2Q12982 314 aa16.86■□□□□ 0.29
PTCD3-210ENST00000473829 ABLIM2Q6H8Q1 611 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms