RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CNTN4Q8IWV2 1026 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CPXM2Q8N436 756 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 HDDC3Q8N4P3 179 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 COLGALT1Q8NBJ5 622 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 RELL2Q8NC24 303 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 OR5M1Q8NGP8 315 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 BBS10Q8TAM1 723 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 HSD17B8Q92506 261 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TFGQ92734 400 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ARL11Q969Q4 196 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 VOPP1Q96AW1 172 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 LINGO1Q96FE5 620 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 C12orf66Q96MD2 445 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 WFIKKN1Q96NZ8 548 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ACBD6Q9BR61 282 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ADPGKQ9BRR6 497 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 MRI1Q9BV20 369 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 NFKBIZQ9BYH8 718 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CHIAQ9BZP6 476 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 POLR2J2Q9GZM3 115 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 DERL2Q9GZP9 239 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ASB8Q9H765 288 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 METTL8Q9H825 291 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TREM1Q9NP99 234 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM212BQ9NTI7 297 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TAS2R16Q9NYV7 291 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 GIMAP2Q9UG22 337 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 STARD10Q9Y365 291 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 PCDHB1Q9Y5F3 818 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 IRAK3Q9Y616 596 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 A0A0D9SG52 128 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ANXA2P07355 339 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ANXA5P08758 320 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 FGF7P21781 194 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 KLRK1P26718 216 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 AVPR1AP37288 418 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 PITPNBP48739 271 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 TDGF1P3P51864 188 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 RAP1BP61224 184 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 CDK6Q00534 326 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 CD69Q07108 199 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 RBBP4Q09028 425 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ITPK1Q13572 414 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 NCMAPQ5T1S8 102 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF648Q5T619 568 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 BSPRYQ5W0U4 402 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 FBXW9Q5XUX1 488 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 KIAA1161Q6NSJ0 714 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF613Q6PF04 617 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 IL34Q6ZMJ4 242 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ANKRD33Q7Z3H0 272 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 OR6V1Q8N148 313 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 TOMM5Q8N4H5 51 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 OR5M3Q8NGP4 307 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 OR10A6Q8NH74 314 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 MR1Q95460 341 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM210BQ96KR6 192 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 TEX37Q96LM6 180 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 PEBP4Q96S96 227 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 S100A13Q99584 98 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 MGME1Q9BQP7 344 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF2Q9BSG1 426 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 NAA11Q9BSU3 229 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 C11orf84Q9BUA3 381 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 THUMPD3Q9BV44 507 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 DDA1Q9BW61 102 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ADGRE3Q9BY15 652 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 PARD6GQ9BYG4 376 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC26A1Q9H2B4 701 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 PRO1933Q9H354 126 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 FKRPQ9H9S5 495 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 GPN1Q9HCN4 374 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 RBM22Q9NW64 420 aaKnown RBP eCLIP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 C1orf109Q9NX04 203 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF503-AS2A6NEH8 195 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 DUXAA6NLW8 204 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 CDRT15L2A8MXV6 281 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 RPL36A-HNRNPH2H7BZ11 118 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 J3KR12 359 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 SYT5O00445 386 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 EMC8O43402 210 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF821O75541 412 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 NFYBP25208 207 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 BDKRB2P30411 391 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 HOXA13P31271 388 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 FEN1P39748 380 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 RAD52P43351 418 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 MAGEB1P43366 347 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 IDH2P48735 452 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 DLX5P56178 289 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 TLE4Q04727 773 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 SCARB2Q14108 478 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 HMGN3Q15651 99 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 UNC50Q53HI1 259 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 PARGQ86W56 976 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 CALHM3Q86XJ0 350 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 GCNT2Q8N0V5 402 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 LINC00482Q8N8I6 264 aa4.74□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM161BQ8NDZ6 487 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms