RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SLC6A8P48029 635 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 GTF2IRD2BQ6EKJ0 949 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 PAPD4Q6PIY7 484 aaKnown RBP15.97■□□□□ 0.15
HSPG2-208ENST00000471322 LINC00114Q6XXX2 140 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 B3GNT6Q6ZMB0 384 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 WDR88Q6ZMY6 472 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 ZNF620Q6ZNG0 422 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 GTF2IRD2Q86UP8 949 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 RAB43Q86YS6 212 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 CLVS1Q8IUQ0 354 aaPredicted RBP15.97■□□□□ 0.15
HSPG2-208ENST00000471322 CYP4Z2PQ8N1L4 340 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 CADM2Q8N3J6 435 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 PHOSPHO1Q8TCT1 267 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 THAP4Q8WY91 577 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 FCGR1BQ92637 280 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 OMA1Q96E52 524 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 SIGLEC11Q96RL6 698 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 IL4I1Q96RQ9 567 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 TSC22D3Q99576 134 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 LAT2Q9GZY6 243 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 EGLN3Q9H6Z9 239 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 P4HTMQ9NXG6 502 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 RPL36Q9Y3U8 105 aaKnown RBP15.97■□□□□ 0.15
HSPG2-208ENST00000471322 HS3ST3B1Q9Y662 390 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 CFAP46Q8IYW2 2715 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 A6NL46 340 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 ZNF99A8MXY4 864 aaPredicted RBP15.97■□□□□ 0.15
HSPG2-208ENST00000471322 PRKNO60260 465 aaPredicted RBP15.97■□□□□ 0.15
HSPG2-208ENST00000471322 PIP5K1CO60331 668 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 NOL3O60936 208 aaKnown RBP15.97■□□□□ 0.15
HSPG2-208ENST00000471322 RCBTB2O95199 551 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 MT-ND2P03891 347 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 CDK1P06493 297 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 PIPP12273 146 aaPredicted RBP15.97■□□□□ 0.15
HSPG2-208ENST00000471322 IFI30P13284 250 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 ABCD3P28288 659 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 GSTT1P30711 240 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 EFR3AQ14156 821 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 SNAPC1Q16533 368 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 WBP2NLQ6ICG8 309 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 ACSM5Q6NUN0 579 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 SLC43A2Q8N370 569 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 STX19Q8N4C7 294 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 TCEANCQ8N8B7 351 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 APCDD1LQ8NCL9 501 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 BRIX1Q8TDN6 353 aaKnown RBP15.97■□□□□ 0.15
HSPG2-208ENST00000471322 BPIFA2Q96DR5 249 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 TSSK6Q9BXA6 273 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 FAM117AQ9C073 453 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 TBC1D23Q9NUY8 699 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 MED17Q9NVC6 651 aa15.97■□□□□ 0.15
HSPG2-208ENST00000471322 PRRC2CQ9Y520 2896 aaKnown RBP15.96■□□□□ 0.15
HSPG2-208ENST00000471322 IGHV3-20A0A0C4DH32 117 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 OR6C70A6NIJ9 312 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 ALG1L2C9J202 215 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 ERVH48-1M5A8F1 160 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 TLX2O43763 284 aaPredicted RBP15.96■□□□□ 0.15
HSPG2-208ENST00000471322 EIF4E2O60573 245 aaKnown RBP15.96■□□□□ 0.15
HSPG2-208ENST00000471322 ADAM11O75078 769 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 ENTPD6O75354 484 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 PNMTP11086 282 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 NAGAP17050 411 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 DCKP27707 260 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 CCL11P51671 97 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 EFNB1P98172 346 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 SKP2Q13309 424 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 TMEM44Q2T9K0 475 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 KIRREL2Q6UWL6 708 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 MEX3DQ86XN8 651 aaKnown RBP15.96■□□□□ 0.15
HSPG2-208ENST00000471322 IQCF1Q8N6M8 205 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 EXD3Q8N9H8 876 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 OR2T33Q8NG76 320 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 OR52L1Q8NGH7 329 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 C9orf43Q8TAL5 461 aaPredicted RBP15.96■□□□□ 0.15
HSPG2-208ENST00000471322 FAR1Q8WVX9 515 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 NMD3Q96D46 503 aaKnown RBP15.96■□□□□ 0.15
HSPG2-208ENST00000471322 WDR77Q9BQA1 342 aaPredicted RBP15.96■□□□□ 0.15
HSPG2-208ENST00000471322 PLA2G12AQ9BZM1 189 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 SLC19A3Q9BZV2 496 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 LHPPQ9H008 270 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 DSN1Q9H410 356 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 PTTG2Q9NZH5 202 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 FBXL4Q9UKA2 621 aa15.96■□□□□ 0.15
HSPG2-208ENST00000471322 SPTA1P02549 2419 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 EFCAB9A8MZ26 197 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 M0R129 80 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 SOCS6O14544 535 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 ICOSLGO75144 302 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 PPM1BO75688 479 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 ZFAND5O76080 213 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 NTN1O95631 604 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 BMP7P18075 431 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 NUDT6P53370 316 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 TMBIM6P55061 237 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 PRR22Q8IZ63 422 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 PFN4Q8NHR9 129 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 TMEM163Q8TC26 289 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 TBL1XR1Q9BZK7 514 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 AMBNQ9NP70 447 aa15.95■□□□□ 0.14
HSPG2-208ENST00000471322 ACOT13Q9NPJ3 140 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms