RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 BEND4Q6ZU67 534 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 ALDH16A1Q8IZ83 802 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 CLECL1Q8IZS7 167 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 PCYOX1LQ8NBM8 494 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 OR4A15Q8NGL6 344 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 OR5W2Q8NH69 310 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 CDRT15Q96T59 188 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 YIPF3Q9GZM5 350 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 ZNF350Q9GZX5 532 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 LAT2Q9GZY6 243 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 SPAG4Q9NPE6 437 aa12.07□□□□□ -0.48
HMGN1-211ENST00000471260 BEX4Q9NWD9 120 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-211ENST00000471260 ZNF469Q96JG9 3925 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-211ENST00000471260 NPIPA5A0A0B4J1W7 369 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 SERINC4A6NH21 518 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 DEFB108AA8MXU0 73 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 NPIPA7E9PJI5 369 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 ACOT8O14734 319 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 TNFAIP8O95379 198 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 NTN1O95631 604 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 NPIPA8P0DM63 369 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 CCKARP32238 428 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 PSME3P61289 254 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 DYNC1I2Q13409 638 aaKnown RBP12.06□□□□□ -0.48
HMGN1-211ENST00000471260 PDK3Q15120 406 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 POU4F3Q15319 338 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 GPR68Q15743 365 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
HMGN1-211ENST00000471260 PDZK1Q5T2W1 519 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 ATAD3BQ5T9A4 648 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 REP15Q6BDI9 236 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 C8orf82Q6P1X6 216 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-211ENST00000471260 C16orf62Q7Z3J2 963 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 SPATA19Q7Z5L4 167 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 SLC43A2Q8N370 569 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 ZNF614Q8N883 585 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 RNF128Q8TEB7 428 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 ST8SIA1Q92185 356 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 KLHDC3Q9BQ90 382 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 MRPS26Q9BYN8 205 aaKnown RBP12.06□□□□□ -0.48
HMGN1-211ENST00000471260 OR51I1Q9H343 314 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 SERHL2Q9H4I8 314 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 TMEM185BQ9H7F4 350 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 ZNF696Q9H7X3 374 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 VCX3AQ9NNX9 186 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 KLHL28Q9NXS3 571 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 BTNL2Q9UIR0 455 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 COMMD3-BMI1R4GMX3 469 aa12.06□□□□□ -0.48
HMGN1-211ENST00000471260 A0A1W2PPR1 153 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 EFNA2O43921 213 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 FCMRO60667 390 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 UGT2B17O75795 530 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 CSTAP01040 98 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 OPN1LWP04000 364 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 UBTFL6P0CB48 400 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-211ENST00000471260 FOSL1P15407 271 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 CD53P19397 219 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 KLK2P20151 261 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 PSMB1P20618 241 aaKnown RBP12.05□□□□□ -0.48
HMGN1-211ENST00000471260 S100A3P33764 101 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 SFTPDP35247 375 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 RAC3P60763 192 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 RPS26P62854 115 aaKnown RBP12.05□□□□□ -0.48
HMGN1-211ENST00000471260 PHC1P78364 1004 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 BNIP2Q12982 314 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 CEACAM7Q14002 265 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 TRIM25Q14258 630 aaKnown RBP12.05□□□□□ -0.48
HMGN1-211ENST00000471260 TMEM176BQ3YBM2 270 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-211ENST00000471260 SPANXN4Q5MJ08 99 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 TMEM201Q5SNT2 666 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 SAXO2Q658L1 398 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 UGT2A3Q6UWM9 527 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 EIF3MQ7L2H7 374 aaKnown RBP12.05□□□□□ -0.48
HMGN1-211ENST00000471260 ARPINQ7Z6K5 226 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 TRIML2Q8N7C3 387 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 BHLHE22Q8NFJ8 381 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-211ENST00000471260 ZFP90Q8TF47 636 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 XAGE5Q8WWM1 108 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 TMEM234Q8WY98 164 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 PIGTQ969N2 578 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 NEURL3Q96EH8 262 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 CCDC115Q96NT0 180 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 PIP5K1AQ99755 562 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 SH3GL3Q99963 347 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 HDHD5Q9BXW7 423 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 SAP130Q9H0E3 1048 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 PAPOLBQ9NRJ5 636 aaKnown RBP12.05□□□□□ -0.48
HMGN1-211ENST00000471260 SERINC1Q9NRX5 453 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 SLC35A3Q9Y2D2 325 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 GPR52Q9Y2T5 361 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 NDUFAF1Q9Y375 327 aa12.05□□□□□ -0.48
HMGN1-211ENST00000471260 TCRBV3S1A0A5B6 114 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 MRASO14807 208 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 OIP5O43482 229 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 KIAA0513O60268 411 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 PRKD3O94806 890 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 CPSF4O95639 269 aaKnown RBP12.04□□□□□ -0.48
HMGN1-211ENST00000471260 OR12D1P0DN82 309 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 PGCP20142 388 aa12.04□□□□□ -0.48
HMGN1-211ENST00000471260 FPR1P21462 350 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms