RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 PTTG3PQ9NZH4 202 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 COPZ2Q9P299 210 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 SCML1Q9UN30 329 aa12.58□□□□□ -0.4
BRCA1-209ENST00000470026 A0A1B0GTQ1 180 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 A0A1B0GVC2 190 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 OR6C74A6NCV1 312 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 A6NIN4 97 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 FABP7O15540 132 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 GATBO75879 557 aaKnown RBP12.57□□□□□ -0.4
BRCA1-209ENST00000470026 TCRBP04435 133 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 S1PR1P21453 382 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 PSG6Q00889 435 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 IKZF1Q13422 519 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 GPR18Q14330 331 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 ANGPT1Q15389 498 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 BCL2L15Q5TBC7 163 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 CD276Q5ZPR3 534 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 OVCH1Q7RTY7 1134 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 RFLNBQ8N5W9 214 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 OR11H7Q8NGC8 314 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 OR5T3Q8NGG3 340 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 OR13C5Q8NGS8 318 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 GRHL3Q8TE85 626 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 SMAP2Q8WU79 429 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-209ENST00000470026 TSACCQ96A04 125 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-209ENST00000470026 RERGQ96A58 199 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-209ENST00000470026 PELI1Q96FA3 418 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 MED28Q9H204 178 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 USP36Q9P275 1121 aaKnown RBP12.57□□□□□ -0.4
BRCA1-209ENST00000470026 HSPB11Q9Y547 144 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 ENTPD2Q9Y5L3 495 aa12.57□□□□□ -0.4
BRCA1-209ENST00000470026 KIAA0100Q14667 2235 aaKnown RBP12.57□□□□□ -0.4
BRCA1-209ENST00000470026 SCN2AQ99250 2005 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 TRBV23OR9-2A0A075B6M9 112 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 FAM221BA6H8Z2 402 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 H0Y8X5 98 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ZNF749O43361 778 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 CA3P07451 260 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 SLC35E2P0CK97 266 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 SRP9P49458 86 aaKnown RBP12.56□□□□□ -0.4
BRCA1-209ENST00000470026 EMDP50402 254 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ACTA2P62736 377 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ACTG2P63267 376 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 PITPNAQ00169 270 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 CCDC85BQ15834 202 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-209ENST00000470026 SLITRK4Q8IW52 837 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 DTX3Q8N9I9 347 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ADAMTS14Q8WXS8 1223 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 THAP4Q8WY91 577 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 PHYHIPQ92561 330 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 DDOQ99489 341 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ZFP64Q9NPA5 681 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 NUDT15Q9NV35 164 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 SPATA2Q9UM82 520 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 CAMK2AQ9UQM7 478 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 CA5BQ9Y2D0 317 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 LRP4O75096 1905 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 NPIPB9F8W1W9 429 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ARL6IP5O75915 188 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 GYPBP06028 91 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 STOMP27105 288 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 GDI2P50395 445 aaKnown RBP12.56□□□□□ -0.4
BRCA1-209ENST00000470026 RAB38P57729 211 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 SNRPD2P62316 118 aaKnown RBP12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ZNF141Q15928 474 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ZSWIM7Q19AV6 140 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ANKRD54Q6NXT1 300 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 RPL22L1Q6P5R6 122 aaKnown RBP12.56□□□□□ -0.4
BRCA1-209ENST00000470026 PARM1Q6UWI2 310 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 LYPD4Q6UWN0 246 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 LYPD8Q6UX82 237 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 DGAT2L6Q6ZPD8 337 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 RD3Q7Z3Z2 195 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ARHGEF39Q8N4T4 335 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ZNF655Q8N720 491 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-209ENST00000470026 OR4D9Q8NGE8 314 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 OR52R1Q8NGF1 315 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ANGPTL6Q8NI99 470 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 C17orf50Q8WW18 174 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 FGF14Q92915 247 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ARSGQ96EG1 525 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 PTCHD1Q96NR3 888 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 RABL2AQ9UBK7 228 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-209ENST00000470026 RABL2BQ9UNT1 228 aa12.56□□□□□ -0.4
BRCA1-209ENST00000470026 PCDHGA9Q9Y5G4 932 aaKnown RBP12.56□□□□□ -0.4
BRCA1-209ENST00000470026 ATG2BQ96BY7 2078 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 A0A1W2PRG6 482 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 C2orf74A8MZ97 194 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 FLRT2O43155 660 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 FOXS1O43638 330 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 NDUFB2O95178 105 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 IGKV1D-16P01601 117 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 HIST1H1CP16403 213 aaKnown RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 GBX2P52951 348 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 SIRPAP78324 504 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 DGCR2P98153 550 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 DYRK1AQ13627 763 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 KLF9Q13886 244 aaPredicted RBP12.55□□□□□ -0.4
BRCA1-209ENST00000470026 TCEA2Q15560 299 aa12.55□□□□□ -0.4
BRCA1-209ENST00000470026 TP53I3Q53FA7 332 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms