RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 PEX14O75381 377 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 PPM1BO75688 479 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 TBX6O95947 436 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 SAGP10523 405 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 TAS2R43P59537 309 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ZP1P60852 638 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 SNTB2Q13425 540 aaKnown RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 KLF9Q13886 244 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 OPCMLQ14982 345 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 PRAMEF14Q5SWL7 426 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 FAM69AQ5T7M9 428 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 PRAMEF13Q5VWM6 474 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 SLC30A6Q6NXT4 461 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 FAM180BQ6P0A1 224 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 TFAP2EQ6VUC0 442 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 NLRC3Q7RTR2 1065 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ADCK2Q7Z695 626 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 FTMTQ8N4E7 242 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 OR5W2Q8NH69 310 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ACOT11Q8WXI4 607 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ALG8Q9BVK2 526 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 TMPRSS13Q9BYE2 586 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ABCG4Q9H172 646 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 LRRN3Q9H3W5 708 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ISG20L2Q9H9L3 353 aaKnown RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 NANSQ9NR45 359 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 SDHAF2Q9NX18 166 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 COQ3Q9NZJ6 369 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 SLC25A13Q9UJS0 675 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 SIRT4Q9Y6E7 314 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 DSPP15924 2871 aaKnown RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ASPMQ8IZT6 3477 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 NAP1L6A6NFF2 107 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 TSPAN4O14817 238 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 PGRMC2O15173 223 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ZNF749O43361 778 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 PLRG1O43660 514 aaKnown RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 NDUFA2O43678 99 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 LDOC1O95751 146 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 CHRM4P08173 479 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 CALCRP30988 508 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 DRD3P35462 400 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 NUP62P37198 522 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 BUD31P41223 144 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ARRB1P49407 418 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 BLVRAP53004 296 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 RAB8AP61006 207 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 CTAG1AP78358 180 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 TSTA3Q13630 321 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 LRRC73Q5JTD7 316 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 CLEC12AQ5QGZ9 265 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 RGS7BPQ6MZT1 257 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 DHRS13Q6UX07 377 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 IL20RBQ6UXL0 311 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 C3P1Q6ZMU1 363 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ZNF620Q6ZNG0 422 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 NUDT13Q86X67 352 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 SPICQ8N5J4 248 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 SIRT6Q8N6T7 355 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 BMPERQ8N8U9 685 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 CHST14Q8NCH0 376 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 OR2T33Q8NG76 320 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 OR10Z1Q8NGY1 313 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ABHD4Q8TB40 342 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 SFXN5Q8TD22 340 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 CXorf40AQ8TE69 158 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 FAM46AQ96IP4 442 aaKnown RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 C12orf66Q96MD2 445 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 DPYSL5Q9BPU6 564 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 PITHD1Q9GZP4 211 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 PELI2Q9HAT8 420 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 NPDC1Q9NQX5 325 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ZC4H2Q9NQZ6 224 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 NLGN3Q9NZ94 848 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 CNIH4Q9P003 139 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 HCN3Q9P1Z3 774 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 TRPC4Q9UBN4 977 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 ACSL5Q9ULC5 683 aa8.86□□□□□ -0.99
HDAC3-205ENST00000469550 TRAV1-2A0A0B4J238 106 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 C17orf113A0A1B0GUU1 675 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 PLSCR5A0PG75 271 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 A8MXK9 166 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 MT-ND5P03915 603 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 CD3GP09693 182 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 ALPPL2P10696 532 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 TYRP1P17643 537 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 PAICSP22234 425 aaKnown RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 CCR6P51684 374 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 VSX2P58304 361 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 PPP2CBP62714 309 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 PPP2CAP67775 309 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 CRYZQ08257 329 aaKnown RBP8.85□□□□□ -0.99
HDAC3-205ENST00000469550 ZNF273Q14593 569 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 ZNF311Q5JNZ3 666 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 ELFN2Q5R3F8 820 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 METTL11BQ5VVY1 283 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 FAM46CQ5VWP2 391 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 FAM198BQ6UWH4 519 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 MBOAT2Q6ZWT7 520 aa8.85□□□□□ -0.99
HDAC3-205ENST00000469550 DPPA4Q7L190 304 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms