RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 GRAMD1BQ3KR37 738 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 SPANXN4Q5MJ08 99 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 CCNJQ5T5M9 372 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 CPTPQ5TA50 214 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 MFSD12Q6NUT3 480 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ARHGAP11AQ6P4F7 1023 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 TMEM81Q6P7N7 255 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 NUP54Q7Z3B4 507 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 SLC22A16Q86VW1 577 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ANKRD46Q86W74 232 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 SAMD14Q8IZD0 417 aaPredicted RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 NAXEQ8NCW5 288 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 C7orf57Q8NEG2 295 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 OR5D16Q8NGK9 328 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 OR5M1Q8NGP8 315 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 OR1J4Q8NGS1 313 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 OR4C3Q8NH37 302 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 PSMA8Q8TAA3 256 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 FAM110BQ8TC76 370 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 DDB2Q92466 427 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF75CPQ92670 426 aaPredicted RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 CDS1Q92903 461 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ERP27Q96DN0 273 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 MTERF3Q96E29 417 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ZBED6CLQ96FA7 236 aaPredicted RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 RMND5BQ96G75 393 aaPredicted RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 TMEM41AQ96HV5 264 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 MAELQ96JY0 434 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ATP6V1G3Q96LB4 118 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF597Q96LX8 424 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 SECISBP2Q96T21 854 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 EBF4Q9BQW3 602 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 OSBPL11Q9BXB4 747 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 UGT2B28Q9BY64 529 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 UCK2Q9BZX2 261 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 STMN4Q9H169 189 aaPredicted RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 DSN1Q9H410 356 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 METTL7AQ9H8H3 244 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ACKR4Q9NPB9 350 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ACSS1Q9NUB1 689 aaPredicted RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 GIMAP4Q9NUV9 329 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ARGLU1Q9NWB6 273 aaPredicted RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 TAS2R9Q9NYW1 312 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 KLRF1Q9NZS2 232 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 MED11Q9P086 117 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 PRODH2Q9UF12 536 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 BOKQ9UMX3 212 aaPredicted RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 RNF6Q9Y252 685 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 CFL2Q9Y281 166 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 WBP11Q9Y2W2 641 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 WIF1Q9Y5W5 379 aa4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 ANKRD17O75179 2603 aaKnown RBP4.33□□□□□ -1.72
EXOSC3-204ENST00000465860 MYO9AB2RTY4 2548 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 AKAP6Q13023 2319 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 C15orf38-AP3S2A0A0A6YYH1 394 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 PRSS44E7EML9 344 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 EMC8O43402 210 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 EFNA2O43921 213 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 HCN1O60741 890 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 BCAS1O75363 584 aaPredicted RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 TRAPPC6AO75865 159 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 UTS2O95399 124 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 OXSR1O95747 527 aaPredicted RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 IFI6P09912 130 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 LBPP18428 481 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 ACVR2AP27037 513 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 HTR1EP28566 365 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 IL12BP29460 328 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 HPCAL1P37235 193 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 CDKN2CP42773 168 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 ASMTP46597 345 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 CCT3P49368 545 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 TMED10P49755 219 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 AGFG1P52594 562 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 SUCLG1P53597 346 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 RBPJQ06330 500 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 FUT5Q11128 374 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 STX5Q13190 355 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 SNTB1Q13884 538 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 LASP1Q14847 261 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 MLC1Q15049 377 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 DECR1Q16698 335 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 SMU1Q2TAY7 513 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 NDUFAF6Q330K2 333 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 SLC30A6Q6NXT4 461 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 ARSKQ6UWY0 536 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 RGS9BPQ6ZS82 235 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 SZRD1Q7Z422 152 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 R3HCC1LQ7Z5L2 792 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 C1QL2Q7Z5L3 287 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 CAMKMTQ7Z624 323 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 HMGN2P46Q86SG4 172 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 PLCZ1Q86YW0 608 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 DND1Q8IYX4 353 aaKnown RBP4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 FADS6Q8N9I5 356 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 GATSQ8NAP1 163 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 TNIP2Q8NFZ5 429 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 OR2M3Q8NG83 312 aa4.32□□□□□ -1.72
EXOSC3-204ENST00000465860 OR9I1Q8NGQ6 314 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms