RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 BLVRAP53004 296 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 ATP5J2P56134 94 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 BTG1P62324 171 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 SKP1P63208 163 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 CDK16Q00536 496 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 PAX5Q02548 391 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 CD300CQ08708 224 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 CDH17Q12864 832 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 GNA13Q14344 377 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 KNOP1Q1ED39 458 aaKnown RBP3.23□□□□□ -1.89
ITGB1-208ENST00000464001 FAM74A3Q4VXF1 159 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 DMKNQ6E0U4 476 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-208ENST00000464001 TWF2Q6IBS0 349 aaKnown RBP3.23□□□□□ -1.89
ITGB1-208ENST00000464001 TRMT10CQ7L0Y3 403 aaKnown RBP3.23□□□□□ -1.89
ITGB1-208ENST00000464001 H2BFWTQ7Z2G1 175 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 ITIH5Q86UX2 942 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 GPR65Q8IYL9 337 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 PYROXD2Q8N2H3 581 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 DNAAF3Q8N9W5 541 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 PROKR2Q8NFJ6 384 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 STXBP6Q8NFX7 210 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 OR7G2Q8NG99 324 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 OR7A2PQ8NGA2 310 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 OR5T3Q8NGG3 340 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 TCP11Q8WWU5 503 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 PIK3R3Q92569 461 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 MYLPFQ96A32 169 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 CIDECQ96AQ7 238 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-208ENST00000464001 UPRTQ96BW1 309 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 ZNF317Q96PQ6 595 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-208ENST00000464001 FMO2Q99518 471 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 CDCA3Q99618 268 aaPredicted RBP3.23□□□□□ -1.89
ITGB1-208ENST00000464001 IKZF5Q9H5V7 419 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 TMEM165Q9HC07 324 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 CCNB1IP1Q9NPC3 277 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 ZNF302Q9NR11 478 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 MED17Q9NVC6 651 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 EURLQ9NYK6 297 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 PRPF19Q9UMS4 504 aaKnown RBP3.23□□□□□ -1.89
ITGB1-208ENST00000464001 RNF6Q9Y252 685 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 R4GN57 208 aa3.23□□□□□ -1.89
ITGB1-208ENST00000464001 MROH7-TTC4A0A0A0MT08 1334 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 IGHV4-30-2A0A087WSY4 118 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 TRBV5-5A0A0J9YX44 114 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 FBLL1A6NHQ2 334 aaKnown RBP3.22□□□□□ -1.89
ITGB1-208ENST00000464001 OR7A17O14581 309 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 CLOCKO15516 846 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 P2RX6O15547 441 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 TPST2O60704 377 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 OR2J3O76001 311 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 LCA5LO95447 670 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 MELTFP08582 738 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 CT62P0C5K7 136 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 ANXA3P12429 323 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 GP1BBP13224 206 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 NQO2P16083 231 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 CCNOP22674 350 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 MMP11P24347 488 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 STOMP27105 288 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 GTF2E2P29084 291 aaKnown RBP3.22□□□□□ -1.89
ITGB1-208ENST00000464001 SPAM1P38567 509 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 SOX3P41225 446 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 SLC1A2P43004 574 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 CRYBB2P43320 205 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 MAGEA9P43362 315 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 STK38Q15208 465 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 MS4A18Q3C1V0 323 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 TMEM52BQ4KMG9 183 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 PAGE2BQ5JRK9 111 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 TCHHL1Q5QJ38 904 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-208ENST00000464001 DCAF12Q5T6F0 453 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 AGAP7PQ5VUJ5 663 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 CLEC6AQ6EIG7 209 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 ASCL4Q6XD76 172 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 Q71RC1 249 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-208ENST00000464001 CEACAM19Q7Z692 300 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 TRIM69Q86WT6 500 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 ST13P4Q8IZP2 240 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-208ENST00000464001 LINC00518Q8N0U6 118 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 GPD1LQ8N335 351 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 RNF10Q8N5U6 811 aaKnown RBP3.22□□□□□ -1.89
ITGB1-208ENST00000464001 CLDN19Q8N6F1 224 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 OR5M9Q8NGP3 310 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 OR9G4Q8NGQ1 327 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 OR13C9Q8NGT0 318 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 MRGPRFQ96AM1 343 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 LRRC45Q96CN5 670 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 CNRIP1Q96F85 164 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-208ENST00000464001 C1orf147Q96MC9 270 aaPredicted RBP3.22□□□□□ -1.89
ITGB1-208ENST00000464001 IL4I1Q96RQ9 567 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 PELOQ9BRX2 385 aaKnown RBP3.22□□□□□ -1.89
ITGB1-208ENST00000464001 TMEM175Q9BSA9 504 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 CHCHD5Q9BSY4 110 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 NDEL1Q9GZM8 345 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 OR52A5Q9H2C5 316 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 PARLQ9H300 379 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 ALG9Q9H6U8 611 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 PSTPIP2Q9H939 334 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 UGT1A10Q9HAW8 530 aa3.22□□□□□ -1.89
ITGB1-208ENST00000464001 SLC25A19Q9HC21 320 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms