RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 N4BP2L2Q92802 583 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 KAT2AQ92830 837 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 C8orf44Q96CB5 159 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 KLHL29Q96CT2 875 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 SPDL1Q96EA4 605 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 GPR137Q96N19 417 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 SLC7A5P2Q9GIP4 190 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 VN1R1Q9GZP7 353 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 PAIP1Q9H074 479 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 RPF2Q9H7B2 306 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 COPS7BQ9H9Q2 264 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 IL1RL2Q9HB29 575 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF304Q9HCX3 659 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 HEYLQ9NQ87 328 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TMEM45AQ9NWC5 275 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 VAPAQ9P0L0 249 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF223Q9UK11 482 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 UTS2RQ9UKP6 389 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 EIF3LQ9Y262 564 aaKnown RBP3.29□□□□□ -1.88
SCFD1-204ENST00000463622 DTX4Q9Y2E6 619 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 TMED5Q9Y3A6 229 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 CAPN7Q9Y6W3 813 aa3.29□□□□□ -1.88
SCFD1-204ENST00000463622 NUP210LQ5VU65 1888 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 C1orf226A1L170 272 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 FAM234BA2RU67 622 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 C17orf51A8MQB3 221 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 MYO1GB0I1T2 1018 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 H0YIG0 161 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 AIM2O14862 343 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF354AO60765 605 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 CTAG2O75638 210 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 TOXO94900 526 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 CPSF4O95639 269 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 WDPCPO95876 746 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 SERPINA7P05543 415 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 FHP07954 510 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 ABCB1P08183 1280 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 PRPS2P11908 318 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 RNH1P13489 461 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 CPMP14384 443 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 S1PR1P21453 382 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 CCKARP32238 428 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 MTPNP58546 118 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 IGLV3-21P80748 117 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 EEF1A2Q05639 463 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 FUT5Q11128 374 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 HSPB3Q12988 150 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 EXOSC7Q15024 291 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 NDUFA9Q16795 377 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 SMU1Q2TAY7 513 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 TUBB8Q3ZCM7 444 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 KLHL22Q53GT1 634 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 TRMT12Q53H54 448 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF628Q5EBL2 1059 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 C10orf62Q5T681 223 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 GARNL3Q5VVW2 1013 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 METTL21CQ5VZV1 264 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 TMEM107Q6UX40 140 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 HMGN2P46Q86SG4 172 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 SIAH3Q8IW03 269 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 TBC1D19Q8N5T2 526 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 RNF148Q8N7C7 305 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 RBM15BQ8NDT2 890 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 MBD3L2Q8NHZ7 208 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 FAM110BQ8TC76 370 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 PTPMT1Q8WUK0 201 aaPredicted RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 TESCQ96BS2 214 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 TBC1D20Q96BZ9 403 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 PPCDCQ96CD2 204 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 GIMAP5Q96F15 307 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 C16orf58Q96GQ5 468 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 MAGED4Q96JG8 741 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 AMDHD1Q96NU7 426 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 SMR3AQ99954 134 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 GPATCH1Q9BRR8 931 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 FAM234AQ9H0X4 552 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 LIME1Q9H400 295 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 LIN28AQ9H9Z2 209 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 LYRM4Q9HD34 91 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 SLC35C2Q9NQQ7 365 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 PRTFDC1Q9NRG1 225 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 TXLNGQ9NUQ3 528 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 LYARQ9NX58 379 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 CMTM6Q9NX76 183 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 TAS2R1Q9NYW7 299 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 MAT2BQ9NZL9 334 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 SH3BGRL2Q9UJC5 107 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 NXT1Q9UKK6 140 aaKnown RBP3.28□□□□□ -1.88
SCFD1-204ENST00000463622 KCNE3Q9Y6H6 103 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 SCN2AQ99250 2005 aa3.28□□□□□ -1.88
SCFD1-204ENST00000463622 NSD1Q96L73 2696 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 A0A1W2PP18 115 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 FAM90A10PA6NDY2 464 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 IDSB3KWA1 339 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 UPK1AO00322 258 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NME4O00746 187 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 TXNDC9O14530 226 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 MRASO14807 208 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ASNA1O43681 348 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms