RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 TRAPPC4Q9Y296 219 aa11.69□□□□□ -0.54
R3HDM1-213ENST00000463230 TMED7-TICAM2A0A0A6YYA0 188 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 AP3D1O14617 1153 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 MRASO14807 208 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 CGAP01215 116 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 PCGF2P35227 344 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 CPA2P48052 419 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 PDK3Q15120 406 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 INTS11Q5TA45 600 aaKnown RBP11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 REP15Q6BDI9 236 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 FCRLAQ7L513 359 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 HMGN2P46Q86SG4 172 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 ADGRG3Q86Y34 549 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 ZNF295-AS1Q8N0V1 137 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 CNEP1R1Q8N9A8 125 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 LRRC58Q96CX6 371 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 OR5B2Q96R09 309 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 SRXN1Q9BYN0 137 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 C12orf10Q9HB07 376 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 PLSCR4Q9NRQ2 329 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 TMED7Q9Y3B3 224 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 PKDREJQ9NTG1 2253 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 ADAM11O75078 769 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 PRKD3O94806 890 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 ENPP1P22413 925 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 KIR2DL3P43628 341 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 PCBP3P57721 371 aaKnown RBP11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 BTLAQ7Z6A9 289 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 ARPINQ7Z6K5 226 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 PATL1Q86TB9 770 aaKnown RBP11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 SNX32Q86XE0 403 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 PTOV1Q86YD1 416 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 CLIP4Q8N3C7 705 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 ZNF559Q9BR84 538 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 POTEKPQ9BYX7 375 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 KLHL28Q9NXS3 571 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 KLHL9Q9P2J3 617 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 KLHL13Q9P2N7 655 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 OSGIN1Q9UJX0 560 aa11.68□□□□□ -0.54
R3HDM1-213ENST00000463230 SULT2B1O00204 365 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 CYTIPO60759 359 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 OPN1LWP04000 364 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 C8BP07358 591 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 TFPIP10646 304 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 TACR3P29371 465 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 LSP1P33241 339 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 AGFG1P52594 562 aaKnown RBP11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 MTPNP58546 118 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 NANOGP8Q6NSW7 305 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 ERICH5Q6P6B1 374 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 PLXDC2Q6UX71 529 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 MTDHQ86UE4 582 aaKnown RBP11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 C10orf111Q8N326 155 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 ATP6V1C2Q8NEY4 427 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 NANOGQ9H9S0 305 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 BCO1Q9HAY6 547 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 MCCC2Q9HCC0 563 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 RLIMQ9NVW2 624 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 GALNT8Q9NY28 637 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 CHST2Q9Y4C5 530 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 GMNCA6NCL1 334 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 ZNF724A8MTY0 619 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 FXYD1O00168 92 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 EIF1BO60739 113 aaKnown RBP11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 CD79BP40259 229 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 DIO1P49895 249 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 SIRPAP78324 504 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 DAZAP2Q15038 168 aaPredicted RBP11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 TMEM201Q5SNT2 666 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 PPP4R4Q6NUP7 873 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 VWA1Q6PCB0 445 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 C6orf89Q6UWU4 347 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 STK32CQ86UX6 486 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 ARMC8Q8IUR7 673 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 ZZZ3Q8IYH5 903 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 RASSF5Q8WWW0 418 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 TRIM2Q9C040 744 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 OR10A4Q9H209 315 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 TESQ9UGI8 421 aaKnown RBP11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 SLC13A4Q9UKG4 626 aa11.67□□□□□ -0.54
R3HDM1-213ENST00000463230 CYSRT1A8MQ03 144 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 SMNDC1O75940 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 DRD4P21917 467 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 CXCR1P25024 350 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 AGTR1P30556 359 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 GZMMP51124 257 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 SLC35A1P78382 337 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 MYBPHQ13203 477 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 SELPLGQ14242 412 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 ABLIM2Q6H8Q1 611 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 C5orf46Q6UWT4 87 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 CCDC80Q76M96 950 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 CALHM3Q86XJ0 350 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 LSMEM1Q8N8F7 131 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 PIGXQ8TBF5 258 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 PIF1Q9H611 641 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 EMC3Q9P0I2 261 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 TMEM181Q9P2C4 612 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 A0A1W2PNR3 127 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 TMEM72A0PK05 275 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms