RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 GABRG1Q8N1C3 465 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 GTF2H4Q92759 462 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 PMM1Q92871 262 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 DNAJA3Q96EY1 480 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 ARL5BQ96KC2 179 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 HS3ST6Q96QI5 342 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 ZNF300Q96RE9 604 aaPredicted RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 CCDC28BQ9BUN5 200 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 OR11A1Q9GZK7 315 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 PAIP1Q9H074 479 aaKnown RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 OR10A4Q9H209 315 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 RAD21L1Q9H4I0 556 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 MTHFD2LQ9H903 347 aaPredicted RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 VIPAS39Q9H9C1 493 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 UBTD1Q9HAC8 227 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 CACYBPQ9HB71 228 aaKnown RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 THUMPD1Q9NXG2 353 aaKnown RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 CCDC167Q9P0B6 97 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 ZNF443Q9Y2A4 671 aaPredicted RBP9.04□□□□□ -0.96
SF3A3-204ENST00000462258 GPR52Q9Y2T5 361 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 HDGFL3Q9Y3E1 203 aa9.04□□□□□ -0.96
SF3A3-204ENST00000462258 A0A096LPI6 279 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 TMED7-TICAM2A0A0A6YYA0 188 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 CDHR4A6H8M9 788 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 ZNF724A8MTY0 619 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 DNPH1O43598 174 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 THBS1P07996 1170 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 TFPTP0C1Z6 253 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 HOXB9P17482 250 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-204ENST00000462258 CCNA2P20248 432 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 IL32P24001 234 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 FKBP2P26885 142 aaKnown RBP9.03□□□□□ -0.96
SF3A3-204ENST00000462258 LOXP28300 417 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-204ENST00000462258 TACR3P29371 465 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 SLC1A3P43003 542 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 OR3A2P47893 321 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 FADDQ13158 208 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 SQLEQ14534 574 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 TSC22D1Q15714 1073 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.03□□□□□ -0.96
SF3A3-204ENST00000462258 LSRQ86X29 649 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-204ENST00000462258 VRK2Q86Y07 508 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 ADGRG3Q86Y34 549 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 WFDC8Q8IUA0 241 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 TGIF2LYQ8IUE0 185 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 ZNF440Q8IYI8 595 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 STEAP2Q8NFT2 490 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 OR52P1PQ8NH57 321 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 PIGXQ8TBF5 258 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 SLC38A5Q8WUX1 472 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 KISS1RQ969F8 398 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-204ENST00000462258 S100PBPQ96BU1 408 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 DDIT4LQ96D03 193 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 SPDL1Q96EA4 605 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 MAGEB18Q96M61 343 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 POTEKPQ9BYX7 375 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 BEX4Q9NWD9 120 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-204ENST00000462258 EMC3Q9P0I2 261 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 PRSS50Q9UI38 385 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 OSGIN1Q9UJX0 560 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 TMED7Q9Y3B3 224 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 PCDHB14Q9Y5E9 798 aa9.03□□□□□ -0.96
SF3A3-204ENST00000462258 MAP1AP78559 2803 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-204ENST00000462258 IGKV3D-15A0A087WSY6 115 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 TMEM72A0PK05 275 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF716A6NP11 495 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF814B7Z6K7 855 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 CLIC1O00299 241 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF208O43345 1280 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 ADAP00813 363 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 NUDT7P0C024 238 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 GKN3PP0CG01 181 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 BMP2P12643 396 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 FPR1P21462 350 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 EDNRAP25101 427 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 CLK1P49759 484 aaKnown RBP9.02□□□□□ -0.97
SF3A3-204ENST00000462258 ATP4BP51164 291 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 NR1H2P55055 460 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 IRX1P78414 480 aaPredicted RBP9.02□□□□□ -0.97
SF3A3-204ENST00000462258 LARS2Q15031 903 aaKnown RBP9.02□□□□□ -0.97
SF3A3-204ENST00000462258 P2RY6Q15077 328 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 RGNQ15493 299 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 LRIF1Q5T3J3 769 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 SFRP5Q5T4F7 317 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 BLOC1S3Q6QNY0 202 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 C20orf204Q6ZNR8 217 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 Q6ZT83 130 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 GALNT5Q7Z7M9 940 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 MTDHQ86UE4 582 aaKnown RBP9.02□□□□□ -0.97
SF3A3-204ENST00000462258 FUNDC1Q8IVP5 155 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 MSRB3Q8IXL7 192 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 BBS10Q8TAM1 723 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 CKAP2Q8WWK9 683 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 STON2Q8WXE9 905 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 MAL2Q969L2 176 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF775Q96BV0 537 aaPredicted RBP9.02□□□□□ -0.97
SF3A3-204ENST00000462258 PLPPR2Q96GM1 343 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 CCL19Q99731 98 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 TMUB1Q9BVT8 246 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 A4GALTQ9NPC4 353 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms