RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ME2P23368 584 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 MYF6P23409 242 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 PIK3R1P27986 724 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 TLX1P31314 330 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 BSGP35613 385 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 KIR2DL3P43628 341 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 EMP2P54851 167 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 LIM2P55344 173 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 RAB38P57729 211 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 RAB4BP61018 213 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 COPZ1P61923 177 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 GALK2Q01415 458 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 PMPCAQ10713 525 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 SLC13A2Q13183 592 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 IKZF1Q13422 519 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 RUNX2Q13950 521 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 UGT3A2Q3SY77 523 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 ATP6AP1LQ52LC2 224 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 SPIN4Q56A73 249 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 INTS11Q5TA45 600 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 FAM180BQ6P0A1 224 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 C8orf82Q6P1X6 216 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 PAOXQ6QHF9 649 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 ZNF793Q6ZN11 406 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 COMMD6Q7Z4G1 85 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 AMIGO2Q86SJ2 522 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 IGFN1Q86VF2 1251 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 CXorf67Q86X51 503 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 P3H2Q8IVL5 708 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 SLC44A2Q8IWA5 706 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 MICU2Q8IYU8 434 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 GHDCQ8N2G8 530 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 METTL4Q8N3J2 472 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 ZCCHC7Q8N3Z6 543 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 FAM47BQ8NA70 645 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 OR6S1Q8NH40 331 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 TMIGD2Q96BF3 282 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 TUBGCP3Q96CW5 907 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 ASB9Q96DX5 294 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 APIPQ96GX9 242 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 C16orf92Q96LL3 132 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 PPP1R36Q96LQ0 422 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 CNBD2Q96M20 576 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 SLC29A1Q99808 456 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 MAPKAP1Q9BPZ7 522 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 MESP1Q9BRJ9 268 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 CHID1Q9BWS9 393 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 JAM3Q9BX67 310 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 TUBB1Q9H4B7 451 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 DDX31Q9H8H2 851 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 WDR41Q9HAD4 459 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 LRTM1Q9HBL6 345 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 RPRD1BQ9NQG5 326 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 PRTFDC1Q9NRG1 225 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 AP5S1Q9NUS5 200 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 PNPOQ9NVS9 261 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 BEX4Q9NWD9 120 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 LYARQ9NX58 379 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 MS4A12Q9NXJ0 267 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 MALT1Q9UDY8 824 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 MARCOQ9UEW3 520 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 CD300AQ9UGN4 299 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 ENPP5Q9UJA9 477 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 LAMP5Q9UJQ1 280 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 C3orf18Q9UK00 162 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 ADAM29Q9UKF5 820 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 FBXW2Q9UKT8 454 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 MRPS33Q9Y291 106 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 UGT2A1Q9Y4X1 527 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 ASB4Q9Y574 426 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 PTGDR2Q9Y5Y4 395 aa5.48□□□□□ -1.53
SMARCC1-204ENST00000462198 NUP214P35658 2090 aaPredicted RBP5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 A0A1B0GWJ7 208 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 ATP6AP2A0A1C7CYW4 349 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 PCP4L1A6NKN8 68 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 DBX1A6NMT0 343 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 H3BUI4 141 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 DLGAP1O14490 977 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 PHF1O43189 567 aaPredicted RBP5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 TMPRSS11DO60235 418 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 PCDH7O60245 1069 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 CLN5O75503 358 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 CRTAPO75718 401 aaPredicted RBP5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 ATP6AP2O75787 350 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 IL6P05231 212 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 SERPINA7P05543 415 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 CYC1P08574 325 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 ANXA4P09525 319 aaPredicted RBP5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 C8orf89P0DMQ9 161 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 NR2F6P10588 404 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 OSMP13725 252 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 PRPH2P23942 346 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 EPHA3P29320 983 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 CD40LGP29965 261 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 SLC7A1P30825 629 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 TIA1P31483 386 aaKnown RBP eCLIP5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 UGT2B10P36537 528 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 HPCAL1P37235 193 aa5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 BUD31P41223 144 aaPredicted RBP5.47□□□□□ -1.53
SMARCC1-204ENST00000462198 CASP3P42574 277 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms