RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 OIP5O43482 229 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 CYTIPO60759 359 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 CNOT4O95628 575 aaKnown RBP7.89□□□□□ -1.15
LDB1-203ENST00000461873 GSNP06396 782 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 VIMP08670 466 aaKnown RBP7.89□□□□□ -1.15
LDB1-203ENST00000461873 GGT1P19440 569 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 PGM1P36871 562 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 POLR2HP52434 150 aaKnown RBP7.89□□□□□ -1.15
LDB1-203ENST00000461873 MAP2K6P52564 334 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 SLC18A1P54219 525 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 RPS4XP62701 263 aaKnown RBP7.89□□□□□ -1.15
LDB1-203ENST00000461873 SLC35A1P78382 337 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 PPP2R2BQ00005 443 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 CHRNEQ04844 493 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 LIN52Q52LA3 116 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 PDCD4Q53EL6 469 aaKnown RBP7.89□□□□□ -1.15
LDB1-203ENST00000461873 KLHL17Q6TDP4 642 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 KLHL24Q6TFL4 600 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 PRSS57Q6UWY2 283 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 CLEC9AQ6UXN8 241 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 TFAP2EQ6VUC0 442 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 LRRC74BQ6ZQY2 392 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 Q6ZT83 130 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 NUFIP2Q7Z417 695 aaKnown RBP7.89□□□□□ -1.15
LDB1-203ENST00000461873 MTDHQ86UE4 582 aaKnown RBP7.89□□□□□ -1.15
LDB1-203ENST00000461873 P2RY8Q86VZ1 359 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 WFDC11Q8NEX6 87 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 PNPT1Q8TCS8 783 aaKnown RBP7.89□□□□□ -1.15
LDB1-203ENST00000461873 AKAP1Q92667 903 aaKnown RBP eCLIP7.89□□□□□ -1.15
LDB1-203ENST00000461873 FBXW5Q969U6 566 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 APH1AQ96BI3 265 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 ZNF775Q96BV0 537 aaPredicted RBP7.89□□□□□ -1.15
LDB1-203ENST00000461873 Q96MF0 132 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 NPAS1Q99742 590 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 C20orf27Q9GZN8 174 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 BCO1Q9HAY6 547 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 CTPS2Q9NRF8 586 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 SELENONQ9NZV5 590 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 TMEM181Q9P2C4 612 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 RPS6KB2Q9UBS0 482 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 HAO1Q9UJM8 370 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 SLC13A4Q9UKG4 626 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 LAMP3Q9UQV4 416 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 HEATR5AQ86XA9 2040 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 TMED7-TICAM2A0A0A6YYA0 188 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 HMGN4O00479 90 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 SDHDO14521 159 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 HS3ST1O14792 307 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 SMAD7O15105 426 aaKnown RBP7.88□□□□□ -1.15
LDB1-203ENST00000461873 DNPH1O43598 174 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 LYZL6O75951 148 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 PMS2P2O95744 297 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 BMP4P12644 408 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 SHC1P29353 583 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 CCKARP32238 428 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 OR3A2P47893 321 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 POLR2JP52435 117 aaKnown RBP7.88□□□□□ -1.15
LDB1-203ENST00000461873 SEC24CP53992 1094 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 ATP5J2P56134 94 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 DSTNP60981 165 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 TGFBR3Q03167 851 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 PPA1Q15181 289 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 SYPL1Q16563 259 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 TMEM225Q6GV28 225 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 OR7E24Q6IFN5 339 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 DNAJC14Q6Y2X3 702 aaPredicted RBP7.88□□□□□ -1.15
LDB1-203ENST00000461873 FRRS1Q6ZNA5 592 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 MSANTD1Q6ZTZ1 278 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 ABHD12BQ7Z5M8 362 aaPredicted RBP7.88□□□□□ -1.15
LDB1-203ENST00000461873 HMGN2P46Q86SG4 172 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 CADM2Q8N3J6 435 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 ZNF611Q8N823 705 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 OR52P1PQ8NH57 321 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 CKAP2Q8WWK9 683 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 RADILQ96JH8 1075 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 PSD2Q9BQI7 771 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 SAP130Q9H0E3 1048 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 SERHL2Q9H4I8 314 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 COQ10BQ9H8M1 238 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 ASB6Q9NWX5 421 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 ZIM2Q9NZV7 527 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 PRDM4Q9UKN5 801 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 IFT52Q9Y366 437 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 TMED7Q9Y3B3 224 aa7.88□□□□□ -1.15
LDB1-203ENST00000461873 C2CD3Q4AC94 2353 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 AGAP5A6NIR3 686 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 SMAD9O15198 467 aaKnown RBP7.87□□□□□ -1.15
LDB1-203ENST00000461873 ZNF208O43345 1280 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 EFNA2O43921 213 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 SNNO75324 88 aaPredicted RBP7.87□□□□□ -1.15
LDB1-203ENST00000461873 NTN1O95631 604 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 TP53P04637 393 aaPredicted RBP7.87□□□□□ -1.15
LDB1-203ENST00000461873 BCHEP06276 602 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 GPIP06744 558 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 ALDOCP09972 364 aaKnown RBP7.87□□□□□ -1.15
LDB1-203ENST00000461873 NID1P14543 1247 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 TACR3P29371 465 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 IDUAP35475 653 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 SLC1A3P43003 542 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 PTH2RP49190 550 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms