RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 MUC20Q8N307 709 aaPredicted RBP10.82□□□□□ -0.68
CPSF3-202ENST00000460593 FAM71CQ8NEG0 241 aa10.82□□□□□ -0.68
CPSF3-202ENST00000460593 FIBINQ8TAL6 211 aa10.82□□□□□ -0.68
CPSF3-202ENST00000460593 ING5Q8WYH8 240 aa10.82□□□□□ -0.68
CPSF3-202ENST00000460593 DVL3Q92997 716 aaPredicted RBP10.82□□□□□ -0.68
CPSF3-202ENST00000460593 ZNF689Q96CS4 500 aaPredicted RBP10.82□□□□□ -0.68
CPSF3-202ENST00000460593 LCORQ96JN0 433 aaPredicted RBP10.82□□□□□ -0.68
CPSF3-202ENST00000460593 GAL3ST1Q99999 423 aa10.82□□□□□ -0.68
CPSF3-202ENST00000460593 GNG8Q9UK08 70 aa10.82□□□□□ -0.68
CPSF3-202ENST00000460593 CCL26Q9Y258 94 aa10.82□□□□□ -0.68
CPSF3-202ENST00000460593 ATG4BQ9Y4P1 393 aa10.82□□□□□ -0.68
CPSF3-202ENST00000460593 ANAPC1Q9H1A4 1944 aa10.82□□□□□ -0.68
CPSF3-202ENST00000460593 UNC119BA6NIH7 251 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 OR6C65A6NJZ3 312 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 H7C2Y5 167 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 POP7O75817 140 aaKnown RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 OR2A4O95047 310 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 WDPCPO95876 746 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 HMGN1P05114 100 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 ELFN1P0C7U0 828 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SAGP10523 405 aaPredicted RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 NT5EP21589 574 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 GALP22466 123 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 GABRR2P28476 465 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 MPIP34949 423 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 PTH2RP49190 550 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 ANXA11P50995 505 aaKnown RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 P2RX1P51575 399 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 RPS11P62280 158 aaKnown RBP eCLIP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 FKBP1BP68106 108 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 FOXK2Q01167 660 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 BDH1Q02338 343 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 GUCA2AQ02747 115 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 MAPK14Q16539 360 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SLC8B1Q6J4K2 584 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SHISA5Q8N114 240 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 PCSK9Q8NBP7 692 aaKnown RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 TMEM185AQ8NFB2 350 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SYNPRQ8TBG9 265 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 BRIX1Q8TDN6 353 aaKnown RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 OR2A7Q96R45 310 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 ZDHHC5Q9C0B5 715 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 KCNK15Q9H427 330 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 XKR8Q9H6D3 395 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SIDT1Q9NXL6 827 aaKnown RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 TAS2R5Q9NYW4 299 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 MED11Q9P086 117 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 KLHL9Q9P2J3 617 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SLC45A1Q9Y2W3 748 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 NPFFR2Q9Y5X5 522 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 CARNS1A5YM72 827 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 FAM171A2A8MVW0 826 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 MAN2B1O00754 1011 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 BHLHE40O14503 412 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 GNB5O14775 395 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SIGLEC6O43699 453 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 GSTZ1O43708 216 aaPredicted RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 ADAMTS4O75173 837 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 CDK2P24941 298 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 FRKP42685 505 aaPredicted RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 EPHA4P54764 986 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 PABPC1L2AQ5JQF8 200 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 UBE2NLQ5JXB2 153 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 TMEM69Q5SWH9 247 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 GID4Q8IVV7 300 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 OR6V1Q8N148 313 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SPICQ8N5J4 248 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SLC16A11Q8NCK7 471 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 OR8S1Q8NH09 359 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 FCAMRQ8WWV6 532 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 GIMAP5Q96F15 307 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 PELI1Q96FA3 418 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 ARHGDIGQ99819 225 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 C7orf50Q9BRJ6 194 aaKnown RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 IL21RQ9HBE5 538 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SLC22A11Q9NSA0 550 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SLC39A1Q9NY26 324 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 ABRACLQ9P1F3 81 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 ZNF346Q9UL40 294 aaKnown RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 LRFN2Q9ULH4 789 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 SLC6A5Q9Y345 797 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 TRBV2A0A0J9YWF9 115 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 PRAF2O60831 178 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 CDC123O75794 336 aaPredicted RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 EDNRAP25101 427 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 NRG3P56975 720 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 TNFRSF17Q02223 184 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 CBFBQ13951 182 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 FAM69AQ5T7M9 428 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 MRM1Q6IN84 353 aaKnown RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 NDUFAF7Q7L592 441 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 TMCO2Q7Z6W1 182 aaPredicted RBP10.81□□□□□ -0.68
CPSF3-202ENST00000460593 LINC00469Q8N7U9 141 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 OR52L1Q8NGH7 329 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 TNFAIP8L1Q8WVP5 186 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 ZNRF4Q8WWF5 429 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 PNPLA2Q96AD5 504 aa10.81□□□□□ -0.68
CPSF3-202ENST00000460593 C19orf43Q9BQ61 176 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms