RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 CLIP4Q8N3C7 705 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 DPP10Q8N608 796 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 SLC39A3Q9BRY0 314 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 SPATA9Q9BWV2 254 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 OR11A1Q9GZK7 315 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 C12orf49Q9H741 205 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 PLSCR4Q9NRQ2 329 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 ELOVL5Q9NYP7 299 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 KLHL13Q9P2N7 655 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 OSGIN1Q9UJX0 560 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 IFT52Q9Y366 437 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 TMED7Q9Y3B3 224 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 CHST2Q9Y4C5 530 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 CELSR1Q9NYQ6 3014 aa12.72□□□□□ -0.37
THBS3-204ENST00000460050 FAM221AA4D161 298 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 SULT2B1O00204 365 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 SMAD9O15198 467 aaKnown RBP12.71□□□□□ -0.37
THBS3-204ENST00000460050 ATP8B1O43520 1251 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 PRKD3O94806 890 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 FESP07332 822 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 PRG2P13727 222 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 ETS2P15036 469 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 TACR3P29371 465 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 MDH1P40925 334 aaKnown RBP12.71□□□□□ -0.37
THBS3-204ENST00000460050 ACAA2P42765 397 aaKnown RBP12.71□□□□□ -0.37
THBS3-204ENST00000460050 CSNK2A1P68400 391 aaPredicted RBP12.71□□□□□ -0.37
THBS3-204ENST00000460050 CDK6Q00534 326 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 NFYCQ13952 458 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 DAZAP2Q15038 168 aaPredicted RBP12.71□□□□□ -0.37
THBS3-204ENST00000460050 RUNDC3AQ59EK9 446 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 ZNF311Q5JNZ3 666 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 TMEM201Q5SNT2 666 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 REEP3Q6NUK4 255 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 ZNF550Q7Z398 422 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 CDH24Q86UP0 819 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 TUSC5Q8IXB3 177 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 DNAJA3Q96EY1 480 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 ARL5BQ96KC2 179 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 DACH2Q96NX9 599 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 CGREF1Q99674 301 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 POLDIP3Q9BY77 421 aaKnown RBP12.71□□□□□ -0.37
THBS3-204ENST00000460050 TMEM38AQ9H6F2 299 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 ARMC7Q9H6L4 198 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 GP6Q9HCN6 339 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 RASSF1Q9NS23 344 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 KLHL9Q9P2J3 617 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 NDRG3Q9UGV2 375 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 HDGFL3Q9Y3E1 203 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 TESMINQ9Y4I5 508 aa12.71□□□□□ -0.37
THBS3-204ENST00000460050 TMEM72A0PK05 275 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 C16orf97H3BN30 126 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 FRS3O43559 492 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 CYTIPO60759 359 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 PMS2P2O95744 297 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 FKBP2P26885 142 aaKnown RBP12.7□□□□□ -0.38
THBS3-204ENST00000460050 UGT2B10P36537 528 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 CLK1P49759 484 aaKnown RBP12.7□□□□□ -0.38
THBS3-204ENST00000460050 MTPNP58546 118 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 SCARB2Q14108 478 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 NUFIP2Q7Z417 695 aaKnown RBP12.7□□□□□ -0.38
THBS3-204ENST00000460050 SERPINA11Q86U17 422 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 STK32CQ86UX6 486 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 KRT73Q86Y46 540 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 CADM2Q8N3J6 435 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 ANKRD27Q96NW4 1050 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 PSD2Q9BQI7 771 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 KLHL4Q9C0H6 718 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 ADAM19Q9H013 955 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 CLEC4MQ9H2X3 399 aaPredicted RBP12.7□□□□□ -0.38
THBS3-204ENST00000460050 SAR1AQ9NR31 198 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 MRGBPQ9NV56 204 aa12.7□□□□□ -0.38
THBS3-204ENST00000460050 ING1Q9UK53 422 aaPredicted RBP12.7□□□□□ -0.38
THBS3-204ENST00000460050 MAP1AP78559 2803 aaPredicted RBP12.69□□□□□ -0.38
THBS3-204ENST00000460050 FBP2O00757 339 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 YES1P07947 543 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 SLC6A2P23975 617 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 COPZ1P61923 177 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 RASGEF1BQ0VAM2 473 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 KLF10Q13118 480 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 SELPLGQ14242 412 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 ADRM1Q16186 407 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 CYP51A1Q16850 503 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 FBXW10Q5XX13 1052 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 ABLIM2Q6H8Q1 611 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 WBP2NLQ6ICG8 309 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 TFAP2EQ6VUC0 442 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 BEND4Q6ZU67 534 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 MTDHQ86UE4 582 aaKnown RBP12.69□□□□□ -0.38
THBS3-204ENST00000460050 HIPK4Q8NE63 616 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 NRGNQ92686 78 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 DDIT4LQ96D03 193 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 ZHX1-C8orf76Q96EF9 292 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 WFIKKN1Q96NZ8 548 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
THBS3-204ENST00000460050 TACO1Q9BSH4 297 aaKnown RBP12.69□□□□□ -0.38
THBS3-204ENST00000460050 MED18Q9BUE0 208 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 SPATA5L1Q9BVQ7 753 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 RSPO3Q9BXY4 272 aaPredicted RBP12.69□□□□□ -0.38
THBS3-204ENST00000460050 BCO1Q9HAY6 547 aa12.69□□□□□ -0.38
THBS3-204ENST00000460050 KLHL28Q9NXS3 571 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms