RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ACTR1BP42025 376 aa18.07■□□□□ 0.48
CNEP1R1-203ENST00000458059 ACTR1AP61163 376 aa18.07■□□□□ 0.48
CNEP1R1-203ENST00000458059 PLAURQ03405 335 aa18.07■□□□□ 0.48
CNEP1R1-203ENST00000458059 HYAL4Q2M3T9 481 aa18.07■□□□□ 0.48
CNEP1R1-203ENST00000458059 AMZ1Q400G9 498 aa18.07■□□□□ 0.48
CNEP1R1-203ENST00000458059 ZNF425Q6IV72 752 aa18.07■□□□□ 0.48
CNEP1R1-203ENST00000458059 SNX33Q8WV41 574 aa18.07■□□□□ 0.48
CNEP1R1-203ENST00000458059 THAP10Q9P2Z0 257 aaPredicted RBP18.07■□□□□ 0.48
CNEP1R1-203ENST00000458059 RCE1Q9Y256 329 aa18.07■□□□□ 0.48
CNEP1R1-203ENST00000458059 PLPP2O43688 288 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 H2AFB2P0C5Z0 115 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 HK1P19367 917 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 EMDP50402 254 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 ODF4Q2M2E3 257 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 PRRT3Q5FWE3 981 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 OR2T35Q8NGX2 323 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 AHCYL2Q96HN2 611 aaKnown RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 METTL17Q9H7H0 456 aaPredicted RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 KCMF1Q9P0J7 381 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 SELENOFO60613 162 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 RPP14O95059 124 aaKnown RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 HIST1H1CP16403 213 aaKnown RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 DNASE1P24855 282 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 SELENOPP49908 381 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 DUSP8Q13202 625 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 ARHGEF6Q15052 776 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 OR2L13Q8N349 312 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 ZPLD1Q8TCW7 415 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 GAL3ST3Q96A11 431 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 UBL7Q96S82 380 aaPredicted RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 KXD1Q9BQD3 176 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 POT1Q9NUX5 634 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 SLC35A3Q9Y2D2 325 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 SEC16AO15027 2179 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 HEATR5AQ86XA9 2040 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 TRBV2A0A0J9YWF9 115 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 A8MUA0 341 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 B3GALT2O43825 422 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 CFDP00746 253 aaPredicted RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 NID1P14543 1247 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 EDNRAP25101 427 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 PTBP1P26599 531 aaKnown RBP eCLIP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 RPL4P36578 427 aaKnown RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 BTG1P62324 171 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 PPP2CBP62714 309 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 PPP2CAP67775 309 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 HTRA4P83105 476 aaPredicted RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 ZNF267Q14586 743 aaPredicted RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 DEFB110Q30KQ9 67 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 ESCO2Q56NI9 601 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 DGAT2L6Q6ZPD8 337 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 MSANTD3Q96H12 275 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 LYARQ9NX58 379 aaKnown RBP18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 FLRT3Q9NZU0 649 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 DAPP1Q9UN19 280 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 IER3IP1Q9Y5U9 82 aa18.06■□□□□ 0.48
CNEP1R1-203ENST00000458059 TRABD2BA6NFA1 517 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 ZNF593O00488 134 aaPredicted RBP18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 FLRT2O43155 660 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 GMFGO60234 142 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 GATBO75879 557 aaKnown RBP18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 LGALSLQ3ZCW2 172 aaPredicted RBP18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 EIPR1Q53HC9 387 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 CHMP1BQ7LBR1 199 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 PAQR7Q86WK9 346 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 NR4A3Q92570 626 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 PELI1Q96FA3 418 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 WDR89Q96FK6 387 aaPredicted RBP18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 NKX3-1Q99801 234 aaPredicted RBP18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 APOOQ9BUR5 198 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 RAB11FIP5Q9BXF6 653 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 A0A1B0GWA3 101 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 GPR171O14626 319 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 HNRNPA1P09651 372 aaKnown RBP eCLIP18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 EPXP11678 715 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 TLX1P31314 330 aaPredicted RBP18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 GDNFP39905 211 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 VEGFCP49767 419 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 VASPP50552 380 aaPredicted RBP18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 C19orf57Q0VDD7 668 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 PLA2G2FQ9BZM2 168 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 ZNF350Q9GZX5 532 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 IGFLR1Q9H665 355 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 LTBP2Q14767 1821 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 CNTRLQ7Z7A1 2325 aa18.05■□□□□ 0.48
CNEP1R1-203ENST00000458059 WDR87Q6ZQQ6 2873 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 RASGRP1O95267 797 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 STPG1Q5TH74 334 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 MED30Q96HR3 178 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 NMNAT3Q96T66 252 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 SEC22CQ9BRL7 303 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 TMEM168Q9H0V1 697 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 TMEM27Q9HBJ8 222 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 KLK11Q9UBX7 282 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 SPATA2Q9UM82 520 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 TDRD6O60522 2096 aaKnown RBP18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 CARNS1A5YM72 827 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 MPC2O95563 127 aa18.04■□□□□ 0.48
CNEP1R1-203ENST00000458059 DBIP07108 87 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms