RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SELENBP1Q13228 472 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 FXNQ16595 210 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 NRF1Q16656 503 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 WBP2NLQ6ICG8 309 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 PLXDC2Q6UX71 529 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 C16orf89Q6UX73 402 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 RINLQ6ZS11 566 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 ESPNLQ6ZVH7 1005 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 DEFB107AQ8IZN7 70 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 LSMEM1Q8N8F7 131 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 RBM15BQ8NDT2 890 aaKnown RBP9.03□□□□□ -0.96
ATG4A-206ENST00000457035 ATP6V1C2Q8NEY4 427 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 OR4D11Q8NGI4 311 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 ITLN2Q8WWU7 325 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-206ENST00000457035 SMPDL3BQ92485 455 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 ZNF845Q96IR2 970 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-206ENST00000457035 TRIB1Q96RU8 372 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 ARHGDIGQ99819 225 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 TMEM185BQ9H7F4 350 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 EVA1AQ9H8M9 152 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 TAS2R1Q9NYW7 299 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 ADA2Q9NZK5 511 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 CLCF1Q9UBD9 225 aa9.03□□□□□ -0.96
ATG4A-206ENST00000457035 ADGRG4Q8IZF6 3080 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 TMED7-TICAM2A0A0A6YYA0 188 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 A0A0G2JNJ9 132 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 MBD3L4A6NDZ8 208 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 MBD3L3A6NE82 208 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 MBD3L5A6NJ08 208 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 CXCR6O00574 342 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 EIF1AYO14602 144 aaKnown RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 TNFSF11O14788 317 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 SEC14L5O43304 696 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 UBOX5O94941 541 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 TGM6O95932 706 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 IFNA14P01570 189 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 HSD17B1P14061 328 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 UQCRBP14927 111 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 GGT1P19440 569 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 ME2P23368 584 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 FKBP2P26885 142 aaKnown RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 COL8A1P27658 744 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 HTR2AP28223 471 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 SFTPDP35247 375 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 POLR2HP52434 150 aaKnown RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 MAP2K6P52564 334 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 CARD18P57730 90 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 RPS3AP61247 264 aaKnown RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 COPZ1P61923 177 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 SELENOWP63302 87 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 CDSNQ15517 529 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 NPTX1Q15818 432 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 CYBRD1Q53TN4 286 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 SAMD4BQ5PRF9 694 aaKnown RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 RIPPLY2Q5TAB7 128 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 C3orf33Q6P1S2 294 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 C6orf89Q6UWU4 347 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 MRGPRGQ86SM5 289 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 LSRQ86X29 649 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 RBM45Q8IUH3 476 aaKnown RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 LACC1Q8IV20 430 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 CADM2Q8N3J6 435 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 RNF148Q8N7C7 305 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 C9orf106Q8NAJ2 232 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 TNIP2Q8NFZ5 429 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 OR6T1Q8NGN1 323 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 OR10D3Q8NH80 312 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 OR2V1Q8NHB1 315 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 MBD3L2Q8NHZ7 208 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 SLC26A7Q8TE54 656 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 RASSF5Q8WWW0 418 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 FIG4Q92562 907 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 RND1Q92730 232 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 OSTF1Q92882 214 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 C3orf49Q96BT1 292 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 KLHL15Q96M94 604 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 KCTD14Q9BQ13 255 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-206ENST00000457035 C1orf21Q9H246 121 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 COQ10BQ9H8M1 238 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 SERINC1Q9NRX5 453 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 NDE1Q9NXR1 346 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 KLHL28Q9NXS3 571 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 Q9UFV3 132 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 CHRNA9Q9UGM1 479 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 RNF6Q9Y252 685 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 TMED7Q9Y3B3 224 aa9.02□□□□□ -0.97
ATG4A-206ENST00000457035 A0A1B0GWA3 101 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 A0A1W2PNR3 127 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 TMEM72A0PK05 275 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 GJE1A6NN92 205 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 M0R3H8 397 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 ZNF208O43345 1280 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 CXCL13O43927 109 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 FMO6PO60774 539 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 RCBTB2O95199 551 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 NCK1P16333 377 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 AGAP20933 346 aa9.01□□□□□ -0.97
ATG4A-206ENST00000457035 MSX2P35548 267 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-206ENST00000457035 EIF1AXP47813 144 aaKnown RBP9.01□□□□□ -0.97
ATG4A-206ENST00000457035 CLK1P49759 484 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms