RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CCDC103Q8IW40 242 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 ADPRHL1Q8NDY3 354 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 ANKK1Q8NFD2 765 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 OR2I1PQ8NGU4 316 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 SLC25A43Q8WUT9 341 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 EFHD2Q96C19 240 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 ISOC1Q96CN7 298 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 SPACA9Q96E40 222 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF582Q96NG8 517 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 IL4I1Q96RQ9 567 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 MFRPQ9BY79 579 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 CXorf56Q9H5V9 222 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 FANCFQ9NPI8 374 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 RASSF1Q9NS23 344 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 ENPP5Q9UJA9 477 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 A3GALT2U3KPV4 340 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 HEATR5AQ86XA9 2040 aa6.25□□□□□ -1.41
ECHDC1-210ENST00000454859 MYOCOSA0A1B0GUC4 107 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 A8MUA0 341 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 A8MVM7 634 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 FRS3O43559 492 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 TRIM3O75382 744 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 GABARAPO95166 117 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 SNX4O95219 450 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 HIST1H2ABP04908 130 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 COX6A1P12074 109 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 MYL12AP19105 171 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 CXCR1P25024 350 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 UGT2B10P36537 528 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 MTNR1AP48039 350 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 EFNA3P52797 238 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 SLC25A1P53007 311 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 MRPL28Q13084 256 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.24□□□□□ -1.417e-7■□□□□ 8.4
ECHDC1-210ENST00000454859 ZNF791Q3KP31 576 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 FOXB2Q5VYV0 432 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 C19orf48Q6RUI8 117 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 LYPD8Q6UX82 237 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 PRR23CQ6ZRP0 262 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 HIST3H2AQ7L7L0 130 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 OLIG3Q7RTU3 272 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 HDDC2Q7Z4H3 204 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ADCK1Q86TW2 530 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 TCEANCQ8N8B7 351 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 POMGNT2Q8NAT1 580 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 OR9Q1Q8NGQ5 310 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 GPR119Q8TDV5 335 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 HIST1H2ACQ93077 130 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 YIPF6Q96EC8 236 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 GPA33Q99795 319 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 APMAPQ9HDC9 416 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 MEPEQ9NQ76 525 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 PAK1IP1Q9NWT1 392 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 TVP23BQ9NYZ1 205 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ERVK-18Q9QC07 812 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 NCDNQ9UBB6 729 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 MOKQ9UQ07 419 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 FARSAQ9Y285 508 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 PTRH2Q9Y3E5 179 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 NSG1A0A0A6YYJ2 146 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 NPIPA5A0A0B4J1W7 369 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 HSPB2A8KAH6 182 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 PROB1E7EW31 1015 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 NPIPA7E9PJI5 369 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 LINC01387J3KSC0 135 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 HCRTR2O43614 444 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 TLX2O43763 284 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 XPNPEP2O43895 674 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 PRKYO43930 277 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 NPIPB7O75200 414 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ENTPD6O75354 484 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 NTN1O95631 604 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 IGHMP01871 453 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 IGHA1P01876 353 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 MT-ND2P03891 347 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 SERPINA7P05543 415 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 UMODP07911 640 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 NPIPA8P0DM63 369 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 SAGP10523 405 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 CCNA2P20248 432 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 MAKP20794 623 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 GSTT1P30711 240 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 GAS1P54826 345 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF117Q03924 483 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF91Q05481 1191 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ZP4Q12836 540 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 MLLT11Q13015 90 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 DYNC1I2Q13409 638 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 LSAMPQ13449 338 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 GGTLC2Q14390 218 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 TRAM1Q15629 374 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 HSPB2Q16082 182 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF74Q16587 644 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ZNF239Q16600 458 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 CRTC2Q53ET0 693 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 ACSM5Q6NUN0 579 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 WDR88Q6ZMY6 472 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 CCDC81Q6ZN84 652 aa6.24□□□□□ -1.41
ECHDC1-210ENST00000454859 AHSA2Q719I0 299 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms