RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 BRIX1Q8TDN6 353 aaKnown RBP4.48□□□□□ -1.69
RIF1-207ENST00000454583 CNOT9Q92600 299 aaKnown RBP4.48□□□□□ -1.69
RIF1-207ENST00000454583 OMA1Q96E52 524 aa4.48□□□□□ -1.69
RIF1-207ENST00000454583 UBL7Q96S82 380 aaPredicted RBP4.48□□□□□ -1.69
RIF1-207ENST00000454583 MRPL13Q9BYD1 178 aaKnown RBP4.48□□□□□ -1.69
RIF1-207ENST00000454583 BARHL1Q9BZE3 327 aa4.48□□□□□ -1.69
RIF1-207ENST00000454583 ING2Q9H160 280 aa4.48□□□□□ -1.69
RIF1-207ENST00000454583 RAD21L1Q9H4I0 556 aa4.48□□□□□ -1.69
RIF1-207ENST00000454583 LIN28AQ9H9Z2 209 aaKnown RBP4.48□□□□□ -1.69
RIF1-207ENST00000454583 SH3BP4Q9P0V3 963 aa4.48□□□□□ -1.69
RIF1-207ENST00000454583 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.48□□□□□ -1.69
RIF1-207ENST00000454583 C3orf18Q9UK00 162 aa4.48□□□□□ -1.69
RIF1-207ENST00000454583 MED19A0JLT2 244 aaPredicted RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 ANKRD61A6NGH8 418 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SERINC4A6NH21 518 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ADAMDEC1O15204 470 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ZNF208O43345 1280 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ICMTO60725 284 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CRCPO75575 148 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 IGLV3-1P01715 115 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 HLA-DQB1P01920 261 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 BCHEP06276 602 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 RFPL3SP0C7P2 107 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CCL3P10147 92 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 OSMP13725 252 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SOX3P41225 446 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 MANFP55145 182 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 CLDN18P56856 261 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 HIST1H3AP68431 136 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 PIGFQ07326 219 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 LASP1Q14847 261 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 POU4F3Q15319 338 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 DCST1Q5T197 706 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 MRPL2Q5T653 305 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 HIST2H3PS2Q5TEC6 136 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 GPR107Q5VW38 600 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 DNAJC14Q6Y2X3 702 aaPredicted RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 DNM1P46Q6ZS02 220 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 HIST2H3AQ71DI3 136 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 MDGA2Q7Z553 956 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 C8orf59Q8N0T1 100 aaPredicted RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 NANOGP1Q8N7R0 232 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ZIC4Q8N9L1 334 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ZNF511Q8NB15 262 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 RAB2BQ8WUD1 216 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CHPT1Q8WUD6 406 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 COL26A1Q96A83 441 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SPACA9Q96E40 222 aaPredicted RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 C1GALT1C1Q96EU7 318 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 TAAR6Q96RI8 345 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 THUMPD3Q9BV44 507 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 SCNM1Q9BWG6 230 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 PRDM14Q9GZV8 571 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SIAEQ9HAT2 523 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 NDUFB11Q9NX14 153 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CCDC59Q9P031 241 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 FOXD3Q9UJU5 478 aaPredicted RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 MKL2Q9ULH7 1088 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 TMEM72A0PK05 275 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 METTL15A6NJ78 407 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 MS4A18H0YCH9 400 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SURF4O15260 269 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 XPNPEP2O43895 674 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 EIF4E2O60573 245 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 CDC123O75794 336 aaPredicted RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 MYO1DO94832 1006 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 OR5F1O95221 314 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CGAP01215 116 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 MT-ND2P03891 347 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ITGB2P05107 769 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CD1AP06126 327 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 DBIP07108 87 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 ANXA8P13928 327 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 KLK2P20151 261 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SHC1P29353 583 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 FBXW4P57775 412 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 RPS3AP61247 264 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 PPP1R8Q12972 351 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 MFAP5Q13361 173 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ZSWIM7Q19AV6 140 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 MS4A18Q3C1V0 323 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 ANKDD1AQ495B1 522 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 BROXQ5VW32 411 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 BICRALQ6AI39 1079 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 PAPD4Q6PIY7 484 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 ISLR2Q6UXK2 745 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 LYPD6Q86Y78 171 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 NKAIN4Q8IVV8 208 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SPACA3Q8IXA5 215 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 BEST3Q8N1M1 668 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 OR10G3Q8NGC4 313 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 TRUB1Q8WWH5 349 aaKnown RBP4.47□□□□□ -1.69
RIF1-207ENST00000454583 SMPDL3BQ92485 455 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 NR4A3Q92570 626 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 VPS50Q96JG6 964 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 COL21A1Q96P44 957 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 WDFY2Q96P53 400 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 CDADC1Q9BWV3 514 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 SLC19A3Q9BZV2 496 aa4.47□□□□□ -1.69
RIF1-207ENST00000454583 FANCEQ9HB96 536 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms