RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 NRF1Q16656 503 aa25.1■■□□□ 1.61
SMARCC1-203ENST00000454240 SYT14P1Q58G82 188 aa25.1■■□□□ 1.61
SMARCC1-203ENST00000454240 FNDC9Q8TBE3 224 aa25.1■■□□□ 1.61
SMARCC1-203ENST00000454240 ZFP3Q96NJ6 502 aa25.1■■□□□ 1.61
SMARCC1-203ENST00000454240 CACNA1CQ13936 2221 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 ZNF208O43345 1280 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 TPST2O60704 377 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 IFNA14P01570 189 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 FESP07332 822 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 T-ENOLP0DO92 83 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 HTR2AP28223 471 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 SLC7A1P30825 629 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 CLK1P49759 484 aaKnown RBP25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 TRPM8Q7Z2W7 1104 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 P4HA3Q7Z4N8 544 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 LIX1LQ8IVB5 337 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 CA5BP1Q8WTZ4 195 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 C3orf49Q96BT1 292 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 NDE1Q9NXR1 346 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 ADA2Q9NZK5 511 aa25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 TESQ9UGI8 421 aaKnown RBP25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 USP9YO00507 2555 aaPredicted RBP25.09■■□□□ 1.61
SMARCC1-203ENST00000454240 A0A1W2PNR3 127 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 TMEM72A0PK05 275 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 TMEM229AB2RXF0 380 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 C16orf89Q6UX73 402 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 OR52E4Q8NGH9 312 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 OR5B2Q96R09 309 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 KCTD14Q9BQ13 255 aaPredicted RBP25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 ZNF559Q9BR84 538 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 PRR14Q9BWN1 585 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 SRXN1Q9BYN0 137 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 TRIM2Q9C040 744 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 RNF122Q9H9V4 155 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 TIGARQ9NQ88 270 aa25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 ZNF629Q9UEG4 869 aaPredicted RBP25.08■■□□□ 1.61
SMARCC1-203ENST00000454240 B2RBV5 119 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 M0R3H8 397 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 CXCR6O00574 342 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 AQP8O94778 261 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 TMIGD3P0DMS9 266 aaPredicted RBP25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 CCNA2P20248 432 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 CALB2P22676 271 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 CXCR1P25024 350 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 CTSSP25774 331 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 CPOXP36551 454 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 RAC3P60763 192 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 OR2A2Q6IF42 318 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 TMPPEQ6ZT21 453 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 ATG4DQ86TL0 474 aaPredicted RBP25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 OR4D11Q8NGI4 311 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 OR6T1Q8NGN1 323 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 CPNE4Q96A23 557 aaPredicted RBP25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 OR11A1Q9GZK7 315 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 BAG5Q9UL15 447 aa25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 MCTS1Q9ULC4 181 aaKnown RBP25.07■■□□□ 1.6
SMARCC1-203ENST00000454240 A1L4Q6 167 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 FMO6PO60774 539 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 SYNGR4O95473 234 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 TFPIP10646 304 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 HTR1EP28566 365 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 MXRA7P84157 204 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 FOXF2Q12947 444 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 NPTX1Q15818 432 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 ZNF239Q16600 458 aaKnown RBP25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 LRRC23Q53EV4 343 aaPredicted RBP25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 CYBRD1Q53TN4 286 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 MAMDC2Q7Z304 686 aaPredicted RBP25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 RANBP3LQ86VV4 465 aaPredicted RBP25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 INTS12Q96CB8 462 aaKnown RBP25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 ARL5BQ96KC2 179 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 CDRT15Q96T59 188 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 C12orf10Q9HB07 376 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 CD300AQ9UGN4 299 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 HDGFL3Q9Y3E1 203 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 KLF2Q9Y5W3 355 aaPredicted RBP25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 HCFC1P51610 2035 aa25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 UTP20O75691 2785 aaKnown RBP25.06■■□□□ 1.6
SMARCC1-203ENST00000454240 A0A1B0GWA3 101 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 GSTA4O15217 222 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 IL18BPO95998 194 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 FCGR2AP12318 317 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 DIO1P49895 249 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 NCALDP61601 193 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 SELENOWP63302 87 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 OR1Q1Q15612 314 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 C6orf89Q6UWU4 347 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 LSRQ86X29 649 aaPredicted RBP25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 DEFB107AQ8IZN7 70 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 RBM15BQ8NDT2 890 aaKnown RBP25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 DDIT4LQ96D03 193 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 PRRG4Q9BZD6 226 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 UCK2Q9BZX2 261 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 RPS6KB2Q9UBS0 482 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 PACSIN3Q9UKS6 424 aa25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 SPTAN1Q13813 2472 aaKnown RBP25.05■■□□□ 1.6
SMARCC1-203ENST00000454240 CRHP06850 196 aa25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 HSD17B1P14061 328 aa25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 GGT1P19440 569 aa25.04■■□□□ 1.6
SMARCC1-203ENST00000454240 MYBPHQ13203 477 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms