RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ASIC5Q9NY37 505 aa10.29□□□□□ -0.76
HERC3-207ENST00000452979 SH3BP4Q9P0V3 963 aa10.29□□□□□ -0.76
HERC3-207ENST00000452979 MGAT4BQ9UQ53 548 aa10.29□□□□□ -0.76
HERC3-207ENST00000452979 A0A1W2PNR3 127 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 H7C417 338 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 SMAD9O15198 467 aaKnown RBP10.28□□□□□ -0.76
HERC3-207ENST00000452979 AKAP10O43572 662 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 EIF4E2O60573 245 aaKnown RBP10.28□□□□□ -0.76
HERC3-207ENST00000452979 DNAJA2O60884 412 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 NUDT14O95848 222 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 FAM107AO95990 144 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 C8BP07358 591 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 BCKDHAP12694 445 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 LBPP18428 481 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 PTNP21246 168 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 PTAFRP25105 342 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 SLC7A1P30825 629 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 ATP12AP54707 1039 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 EMX2Q04743 252 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 RAB35Q15286 201 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
HERC3-207ENST00000452979 IL23RQ5VWK5 629 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 CYB5R2Q6BCY4 276 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 NXNQ6DKJ4 435 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 CDC73Q6P1J9 531 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 TMEM108Q6UXF1 575 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 SZRD1Q7Z422 152 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 PIGWQ7Z7B1 504 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 MUC15Q8N387 334 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 ZNF433Q8N7K0 673 aaPredicted RBP10.28□□□□□ -0.76
HERC3-207ENST00000452979 ATP6V1C2Q8NEY4 427 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 CLHC1Q8NHS4 586 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 OTUB1Q96FW1 271 aaPredicted RBP10.28□□□□□ -0.76
HERC3-207ENST00000452979 TSSK3Q96PN8 268 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 ZNF300Q96RE9 604 aaPredicted RBP10.28□□□□□ -0.76
HERC3-207ENST00000452979 CCT8L2Q96SF2 557 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 CCDC28BQ9BUN5 200 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 ZNF385DQ9H6B1 395 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 ZCCHC3Q9NUD5 404 aaKnown RBP10.28□□□□□ -0.76
HERC3-207ENST00000452979 AIG1Q9NVV5 245 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 BAIAP2L1Q9UHR4 511 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 TMED5Q9Y3A6 229 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 DTNAQ9Y4J8 743 aa10.28□□□□□ -0.76
HERC3-207ENST00000452979 IGKV3D-15A0A087WSY6 115 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 C9JVG2 144 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 ANKRD28O15084 1053 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 ZNF264O43296 627 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 G6PDP11413 515 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 ATP6V1C1P21283 382 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 CD40P25942 277 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 ASMTP46597 345 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 ARFIP2P53365 341 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 CASP9P55211 416 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 LASP1Q14847 261 aaKnown RBP10.27□□□□□ -0.77
HERC3-207ENST00000452979 PDK3Q15120 406 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 SMU1Q2TAY7 513 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 FBXW9Q5XUX1 488 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 R3HCC1LQ7Z5L2 792 aaKnown RBP10.27□□□□□ -0.77
HERC3-207ENST00000452979 CPLX4Q7Z7G2 160 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 GALNT5Q7Z7M9 940 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 TOR1AIP2Q8NFQ8 470 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 OR5W2Q8NH69 310 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 PSMA8Q8TAA3 256 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 ADAMTS15Q8TE58 950 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 C10orf105Q8TEF2 133 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 JADE3Q92613 823 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 ZNF775Q96BV0 537 aaPredicted RBP10.27□□□□□ -0.77
HERC3-207ENST00000452979 MUS81Q96NY9 551 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 ACTRT3Q9BYD9 372 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 AMBRA1Q9C0C7 1298 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 GPATCH2Q9NW75 528 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 NOP53Q9NZM5 478 aaKnown RBP10.27□□□□□ -0.77
HERC3-207ENST00000452979 ATP6V1HQ9UI12 483 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 GPR45Q9Y5Y3 372 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 SLC25A15Q9Y619 301 aa10.27□□□□□ -0.77
HERC3-207ENST00000452979 ALPK2Q86TB3 2170 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 NPIPA5A0A0B4J1W7 369 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 NPIPA7E9PJI5 369 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 GTPBP1O00178 669 aaKnown RBP10.26□□□□□ -0.77
HERC3-207ENST00000452979 H6PDO95479 791 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 NPIPA8P0DM63 369 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 IGHV4-31P0DP07 118 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 DDX5P17844 614 aaKnown RBP10.26□□□□□ -0.77
HERC3-207ENST00000452979 DIO1P49895 249 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 EFNA4P52798 201 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 CBFBQ13951 182 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 QPRTQ15274 297 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 NDUFAF6Q330K2 333 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 TIGD2Q4W5G0 525 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 DCST2Q5T1A1 773 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 ZNF544Q6NX49 715 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 C3orf33Q6P1S2 294 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 SLC22A25Q6T423 547 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 KLHL17Q6TDP4 642 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 TMPPEQ6ZT21 453 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 SPATA19Q7Z5L4 167 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 MTDHQ86UE4 582 aaKnown RBP10.26□□□□□ -0.77
HERC3-207ENST00000452979 ZNF100Q8IYN0 542 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 FBXL14Q8N1E6 418 aa10.26□□□□□ -0.77
HERC3-207ENST00000452979 KRTCAP2Q8N6L1 136 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms