RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 HMGA2P52926 109 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 EXOC3L2Q2M3D2 409 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 DCST1Q5T197 706 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 HMBOX1Q6NT76 420 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 C3orf33Q6P1S2 294 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 TTC33Q6PID6 262 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-210ENST00000449116 WDR88Q6ZMY6 472 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 TRILQ7L0X0 811 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 LILRA2Q8N149 483 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 PQLC1Q8N2U9 271 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 OR4C15Q8NGM1 316 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 NEIL3Q8TAT5 605 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 SLC7A13Q8TCU3 470 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 TMEM255BQ8WV15 326 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 TMEM239Q8WW34 195 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 CENPNQ96H22 339 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-210ENST00000449116 HS6ST2Q96MM7 605 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 ALPK1Q96QP1 1244 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 ZNF426Q9BUY5 554 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 TSPAN10Q9H1Z9 355 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-210ENST00000449116 LDAHQ9H6V9 325 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 DCLRE1BQ9H816 532 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 NTN4Q9HB63 628 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 NPIPA1Q9UND3 350 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 SLC6A5Q9Y345 797 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 LIPGQ9Y5X9 500 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 U3KQV3 271 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 TRGV5A0A0B4J1U4 118 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 A8MVM7 634 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 H3BML4 177 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 ATXN7O15265 892 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-210ENST00000449116 EFNA2O43921 213 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 E2F6O75461 281 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 ANPEPP15144 967 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 DNAJA1P31689 397 aaKnown RBP13.21□□□□□ -0.29
SHANK2-210ENST00000449116 RAC1P63000 192 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 RIPK1Q13546 671 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 NHSL2Q5HYW2 709 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 PODNL1Q6PEZ8 512 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 ZNF730Q6ZMV8 503 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 CISD2Q8N5K1 135 aaKnown RBP13.21□□□□□ -0.29
SHANK2-210ENST00000449116 LSM14AQ8ND56 463 aaKnown RBP13.21□□□□□ -0.29
SHANK2-210ENST00000449116 STK35Q8TDR2 534 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 SLC25A43Q8WUT9 341 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-210ENST00000449116 ACOT11Q8WXI4 607 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-210ENST00000449116 DDIT4LQ96D03 193 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 FUZQ9BT04 418 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 TMEM43Q9BTV4 400 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 SLC19A3Q9BZV2 496 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 SEMA6AQ9H2E6 1030 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 EXO5Q9H790 373 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 C6orf203Q9P0P8 240 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-210ENST00000449116 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.29
SHANK2-210ENST00000449116 TMCC3Q9ULS5 477 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 ZNF337Q9Y3M9 751 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 AP4B1Q9Y6B7 739 aa13.21□□□□□ -0.29
SHANK2-210ENST00000449116 TLN1Q9Y490 2541 aaKnown RBP13.21□□□□□ -0.29
SHANK2-210ENST00000449116 ITPR1Q14643 2758 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 SPENQ96T58 3664 aaKnown RBP13.2□□□□□ -0.3
SHANK2-210ENST00000449116 IGKV1D-42A0A075B6H8 117 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 A0A087WUU8 490 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 A0A1B0GVC2 190 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 SH3PXD2BA1X283 911 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 GJE1A6NN92 205 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 ACTL6AO96019 429 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 PEPDP12955 493 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 POU3F2P20265 443 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-210ENST00000449116 FPR1P21462 350 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 CLK1P49759 484 aaKnown RBP13.2□□□□□ -0.3
SHANK2-210ENST00000449116 ARHGDIAP52565 204 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 IST1P53990 364 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 UGT2B15P54855 530 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 EGR4Q05215 589 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 PPP1R8Q12972 351 aaKnown RBP13.2□□□□□ -0.3
SHANK2-210ENST00000449116 SEC23BQ15437 767 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 SYT14P1Q58G82 188 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 ZNF324BQ6AW86 544 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-210ENST00000449116 SHQ1Q6PI26 577 aaKnown RBP13.2□□□□□ -0.3
SHANK2-210ENST00000449116 C5orf46Q6UWT4 87 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 MBOAT2Q6ZWT7 520 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 RNF113BQ8IZP6 322 aaKnown RBP13.2□□□□□ -0.3
SHANK2-210ENST00000449116 ATP6V1C2Q8NEY4 427 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 FAR1Q8WVX9 515 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 ABTB1Q969K4 478 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-210ENST00000449116 SNRNP40Q96DI7 357 aaKnown RBP13.2□□□□□ -0.3
SHANK2-210ENST00000449116 GPR137Q96N19 417 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 TMEM185BQ9H7F4 350 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 PLSCR2Q9NRY7 297 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 STOML1Q9UBI4 398 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 MED31Q9Y3C7 131 aa13.2□□□□□ -0.3
SHANK2-210ENST00000449116 ZC3H12DA2A288 527 aaKnown RBP13.19□□□□□ -0.3
SHANK2-210ENST00000449116 KPNA4O00629 521 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-210ENST00000449116 AQP7O14520 342 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 NPIPB7O75200 414 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 CCNB2O95067 398 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 BMP7P18075 431 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 PTNP21246 168 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 MICAQ29983 383 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 KRTCAP3Q53RY4 240 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms