RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PLA2G2CQ5R387 149 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 CPZQ66K79 652 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 FRMPD2BQ6IN97 320 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 SPATC1Q76KD6 591 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 DNAJA4Q8WW22 397 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 CMTM3Q96MX0 182 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 SORBS1Q9BX66 1292 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 C6orf62Q9GZU0 229 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 MOV10Q9HCE1 1003 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 MAGEL2Q9UJ55 1249 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 PRPF19Q9UMS4 504 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 SNX13Q9Y5W8 968 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ROS1P08922 2347 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 SPRY3O43610 288 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ECDO95905 644 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 CYC1P08574 325 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 GSTP1P09211 210 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 IFI30P13284 250 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 APEX1P27695 318 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 MNDAP41218 407 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 FADDQ13158 208 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 C2orf76Q3KRA6 126 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 FAM111BQ6SJ93 734 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 PHTF2Q8N3S3 785 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 POU5F2Q8N7G0 328 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 GOLM1Q8NBJ4 401 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 OSTF1Q92882 214 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR5M11Q96RB7 305 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 PLK3Q9H4B4 646 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR14J1Q9UGF5 321 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 TICRRQ7Z2Z1 1910 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 H7C1Q1 480 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 FAM153BP0C7A2 387 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 BCKDHAP12694 445 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 BTG2P78543 158 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 UGT8Q16880 541 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 KCNIP4Q6PIL6 250 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 QSOX2Q6ZRP7 698 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 CLEC14AQ86T13 490 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 IGFN1Q86VF2 1251 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZDHHC13Q8IUH4 622 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 DEFB107AQ8IZN7 70 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ASCC1Q8N9N2 400 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 THEM6Q8WUY1 208 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 THRSPQ92748 146 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 FAM210AQ96ND0 272 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 HOPXQ9BPY8 73 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ITPAQ9BY32 194 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 BHLHE41Q9C0J9 482 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 DNTTIP1Q9H147 329 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 PLEK2Q9NYT0 353 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZIM2Q9NZV7 527 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 CD8B2A6NJW9 211 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ADAMDEC1O15204 470 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 TSC22D2O75157 780 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 GABRR1P24046 479 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 PPICP45877 212 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 RPS6KA3P51812 740 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 PSME3P61289 254 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZMYND11Q15326 602 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ALG10BQ5I7T1 473 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 SPANXN4Q5MJ08 99 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 C5orf46Q6UWT4 87 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 NET1Q7Z628 596 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 GLRX5Q86SX6 157 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 MTURNQ8N3F0 131 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 DYNLRB2Q8TF09 96 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 LRTOMTQ8WZ04 291 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 BSCL2Q96G97 398 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 PCDHB16Q9NRJ7 776 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC17A7Q9P2U7 560 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF229Q9UJW7 825 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 COPS3Q9UNS2 423 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 CARD8Q9Y2G2 431 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 LIPGQ9Y5X9 500 aa5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 MN1Q10571 1320 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-209ENST00000448940 PRKD3O94806 890 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ANGPTL1O95841 491 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 HMGN2P05204 90 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 PRR35P0CG20 571 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SOX3P41225 446 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ERFP50548 548 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ATP12AP54707 1039 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 OR4D1Q15615 310 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 KHDC1Q4VXA5 237 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 DCAF12L2Q5VW00 463 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 PLAG1Q6DJT9 500 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SSX8Q7RTT4 187 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 MICU2Q8IYU8 434 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 RNF148Q8N7C7 305 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 CYGBQ8WWM9 190 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 ZNF501Q96CX3 271 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SGTBQ96EQ0 304 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 Q96MT0 163 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 RAB33BQ9H082 229 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SPAG4Q9NPE6 437 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 SLC22A23A1A5C7 686 aa5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 NCBP2LA6PVI3 153 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-209ENST00000448940 CDK2AP1O14519 115 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms