RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 NUP43Q8NFH3 380 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 OR4F6Q8NGB9 312 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 IL31RAQ8NI17 732 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 FAXDC2Q96IV6 333 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 MSLNLQ96KJ4 702 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 OR4C12Q96R67 309 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 TOLLIPQ9H0E2 274 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 RIMS4Q9H426 269 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-202ENST00000448238 IFT22Q9H7X7 185 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 HHLA2Q9UM44 414 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 SHROOM2Q13796 1616 aa8.43□□□□□ -1.06
NIPBL-202ENST00000448238 GPR75-ASB3A0A0A6YYF3 556 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF623O75123 536 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 ATP1B2P14415 290 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 PREPP48147 710 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 SPCS3P61009 180 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 CHADLQ6NUI6 762 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 RBM23Q86U06 439 aaKnown RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 LSMEM1Q8N8F7 131 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 RBPMSQ93062 196 aaKnown RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 DYNLRB1Q9NP97 96 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 SAMD9LQ8IVG5 1584 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 DICER1Q9UPY3 1922 aaKnown RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 NMBRP28336 390 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 CD1BP29016 333 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 CATSPERGQ6ZRH7 1159 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 RABEPKQ7Z6M1 372 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 THNSL2Q86YJ6 484 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 TAF9BQ9HBM6 251 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 KIAA1456Q9P272 454 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 FTSJ1Q9UET6 329 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 HRH3Q9Y5N1 445 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF609O15014 1411 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 B4DGG1 531 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 H3BVH4 76 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 SYN3O14994 580 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 DEGS1O15121 323 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 UQCC3Q6UW78 93 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 KIAA1191Q96A73 305 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 MUCL1Q96DR8 90 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 ANKMY1Q9P2S6 941 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 CD84Q9UIB8 345 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 WNK1Q9H4A3 2382 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 A0A1W2PQH9 124 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 TUSC2O75896 110 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 HTR1EP28566 365 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 FABP9Q0Z7S8 132 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 LSAMPQ13449 338 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 LY6KQ17RY6 165 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 APOOLQ6UXV4 268 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 MUC15Q8N387 334 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 OR10G3Q8NGC4 313 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 OR1J2Q8NGS2 313 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 RELTQ969Z4 430 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 C20orf85Q9H1P6 137 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 KCNK13Q9HB14 408 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 ADAMTS6Q9UKP5 1117 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 CDC42BPBQ9Y5S2 1711 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 A0A1B0GTQ1 180 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 CD79AP11912 226 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 VIPR2P41587 438 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 KCNJ3P48549 501 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF280AP59817 542 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 METTL2BQ6P1Q9 378 aaKnown RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 OVCH1Q7RTY7 1134 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 ZDHHC7Q9NXF8 308 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 MRPS16Q9Y3D3 137 aaKnown RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 PZPP20742 1482 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 COL1A2P08123 1366 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 FAM155BO75949 473 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 STSP08842 583 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 DBHP09172 617 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF28P17035 718 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 MPGP29372 298 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 PPOXP50336 477 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 EOGTQ5NDL2 527 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 C9orf57Q5W0N0 161 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 FDX2Q6P4F2 183 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 SLC7A5P1Q8MH63 180 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 EXOSC3Q9NQT5 275 aaKnown RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 MRPL42Q9Y6G3 142 aaKnown RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 KLRG2A4D1S0 409 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 FAM227AF5H4B4 570 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 ARNTP27540 789 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 HTR2CP28335 458 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 PDE7AQ13946 482 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 PCBP2Q15366 365 aaKnown RBP eCLIP8.42□□□□□ -1.064e-10■□□□□ 10.2
NIPBL-202ENST00000448238 INPP5JQ15735 1006 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-202ENST00000448238 TMEM119Q4V9L6 283 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 BPIFB2Q8N4F0 458 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 GPR61Q9BZJ8 451 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 RNF208Q9H0X6 261 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 PLEKHF2Q9H8W4 249 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 CA14Q9ULX7 337 aa8.42□□□□□ -1.06
NIPBL-202ENST00000448238 PRAMEF27A3QJZ7 478 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 ZNF724A8MTY0 619 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 J3KR12 359 aa8.41□□□□□ -1.06
NIPBL-202ENST00000448238 C6orf47O95873 294 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms