RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 POPDC2Q9HBU9 364 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 B3GAT2Q9NPZ5 323 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 CHRAC1Q9NRG0 131 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 BARX2Q9UMQ3 279 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 STARD10Q9Y365 291 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 INSRP06213 1382 aa3.62□□□□□ -1.83
HMGB1P48-201ENST00000446155 FER1L5A0AVI2 2057 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 CEP350Q5VT06 3117 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 IGKV3D-15A0A087WSY6 115 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 IGHV3-38A0A0C4DH36 116 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 TRBV11-1A0A0K0K1C0 115 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 A0A1B0GU03 582 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 A0A1W2PPV9 198 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 EPM2AB3EWF7 344 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 H3BMQ9 156 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SOCS3O14543 225 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 TRDMT1O14717 391 aaKnown RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 RGS16O15492 202 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 RNF113AO15541 343 aaKnown RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 ATP5LO75964 103 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 OR2F2O95006 317 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 AP2A1O95782 977 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 CSTAP01040 98 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 IGHG4P01861 327 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SERPINB2P05120 415 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 CRYGCP07315 174 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 ERCC1P07992 297 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 WNT2P09544 360 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 UBTFL6P0CB48 400 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SDC1P18827 310 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 UGT1A4P22310 534 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 PRKACGP22612 351 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 TUBG1P23258 451 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 HOXD10P28358 340 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 QARSP47897 775 aaKnown RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 HLCSP50747 726 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 GSTO1P78417 241 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 ASPHQ12797 758 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 CALCOCO2Q13137 446 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 LY6DQ14210 128 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 TIGITQ495A1 244 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 LINC00242Q5T6M2 205 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 PVRIGQ6DKI7 326 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SLC8B1Q6J4K2 584 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 LCLAT1Q6UWP7 414 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SSX9Q7RTT3 188 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 PRSS48Q7RTY5 328 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SCD5Q86SK9 330 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 TPRA1Q86W33 373 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 MICU2Q8IYU8 434 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 KIR3DL3Q8N743 410 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SPERTQ8NA61 448 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 FNDC8Q8TC99 324 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 GPX8Q8TED1 209 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 GTF3AQ92664 365 aaKnown RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 NRGNQ92686 78 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 TAF15Q92804 592 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 UBE2E3Q969T4 207 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 KIAA1143Q96AT1 154 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SGK3Q96BR1 496 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF707Q96C28 371 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZNF689Q96CS4 500 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 NUS1Q96E22 293 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 WBP1Q96G27 269 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SERAC1Q96JX3 654 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 ANKRD60Q9BZ19 345 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 RHBGQ9H310 441 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 RGCCQ9H4X1 137 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 LZTFL1Q9NQ48 299 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 MEPEQ9NQ76 525 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 SPHK2Q9NRA0 654 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 TUBG2Q9NRH3 451 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 C20orf96Q9NUD7 363 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 AHSPQ9NZD4 102 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 ZMAT5Q9UDW3 170 aaKnown RBP3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 STK38LQ9Y2H1 464 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 FBXO7Q9Y3I1 522 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 PRSS21Q9Y6M0 314 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 AKNAQ7Z591 1439 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 KIF27Q86VH2 1401 aa3.61□□□□□ -1.83
HMGB1P48-201ENST00000446155 FANCAO15360 1455 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 CUL7Q14999 1698 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 IGHV2-70DA0A0C4DH43 119 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 BCLAF3A2AJT9 711 aaKnown RBP3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 GABRR3A8MPY1 467 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 DLGAP1O14490 977 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 POLR3GO15318 223 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 TMEM50AO95807 157 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 HPP00738 406 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 IVLP07476 585 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 CCNB1P14635 433 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 SRMP19623 302 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 MSR1P21757 451 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 CDH5P33151 784 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 CD80P33681 288 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 MAP3K8P41279 467 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 MFAP2P55001 183 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 VGLL4Q14135 290 aa3.6□□□□□ -1.83
HMGB1P48-201ENST00000446155 GLYR1Q49A26 553 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms