RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 OR52I1Q8NGK6 324 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 OR4A4PQ8NGN8 299 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 NDNFQ8TB73 568 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 SUN5Q8TC36 379 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 ZPLD1Q8TCW7 415 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 CD300LFQ8TDQ1 290 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 IL1F10Q8WWZ1 152 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 PIBF1Q8WXW3 757 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 CELF6Q96J87 481 aaKnown RBP4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 ZNF641Q96N77 438 aaPredicted RBP4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 RNF2Q99496 336 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 SCAND2PQ9GZW5 306 aaPredicted RBP4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 WDR13Q9H1Z4 485 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 PPDPFQ9H3Y8 114 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 UGT1A10Q9HAW8 530 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 SPACA1Q9HBV2 294 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 ELOVL2Q9NXB9 296 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 BFARQ9NZS9 450 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 PHF11Q9UIL8 331 aa4.34□□□□□ -1.71
TM9SF3-202ENST00000443638 COL3A1P02461 1466 aaPredicted RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 A0A0G2JLW4 131 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 DNAJC9-AS1A6NH13 148 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 SERPINE3A8MV23 424 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF749O43361 778 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 PSTPIP1O43586 416 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 PRKYO43930 277 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 E2F6O75461 281 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 APOA1P02647 267 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ATP1A1P05023 1023 aaKnown RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 NGFRP08138 427 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 GATA1P15976 413 aaPredicted RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 RRM2P31350 389 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 RDXP35241 583 aaKnown RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 PRKXP51817 358 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 SELENBP1Q13228 472 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF177Q13360 481 aaPredicted RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 SYCP1Q15431 976 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 DUSP7Q16829 419 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 CYP51A1Q16850 503 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 MUC21Q5SSG8 566 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF57Q68EA5 555 aaPredicted RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 C22orf42Q6IC83 251 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 FAM53AQ6NSI3 398 aaPredicted RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ERO1BQ86YB8 467 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 MMAAQ8IVH4 418 aaKnown RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 APLFQ8IW19 511 aaPredicted RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 TPRX1Q8N7U7 411 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 OR4A15Q8NGL6 344 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 FLVCR1-AS1Q8TAF5 88 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF596Q8TC21 504 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ASZ1Q8WWH4 475 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 MRPS31Q92665 395 aaKnown RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 CXorf40BQ96DE9 158 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ZBED6CLQ96FA7 236 aaPredicted RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 OXGR1Q96P68 337 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 TMEM204Q9BSN7 226 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 OR51M1Q9H341 326 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 RNF41Q9H4P4 317 aaPredicted RBP4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 TMEM165Q9HC07 324 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 CCNB1IP1Q9NPC3 277 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 MYOZ2Q9NPC6 264 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 IL26Q9NPH9 171 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 PXMP2Q9NR77 195 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 ANGPTL2Q9UKU9 493 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 GAB2Q9UQC2 676 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 FBXO7Q9Y3I1 522 aa4.33□□□□□ -1.72
TM9SF3-202ENST00000443638 USP47Q96K76 1375 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF521Q96K83 1311 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 NSG1A0A0A6YYJ2 146 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 SAGE2PA6NJ88 616 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 IQCF5A8MTL0 148 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 TRDCB7Z8K6 153 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 SLCO1B7G3V0H7 640 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 GFYI3L273 518 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 OR10H3O60404 316 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 MAGEC1O60732 1142 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 COX5AP20674 150 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 DCKP27707 260 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 PDHA2P29803 388 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 DEKP35659 375 aaKnown RBP4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 PTGDSP41222 190 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 NSG1P42857 185 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 DAP3P51398 398 aaKnown RBP4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 MFAP2P55001 183 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 LINC00205P59089 165 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 RAD51Q06609 339 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 CDH17Q12864 832 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 TRDNQ13061 729 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 RCAN2Q14206 197 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF672Q499Z4 452 aaPredicted RBP4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 XKR4Q5GH76 650 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 BEX5Q5H9J7 111 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 MS4A13Q5J8X5 152 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 C9orf135Q5VTT2 229 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 ASCL4Q6XD76 172 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 SLC16A14Q7RTX9 510 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 HDDC2Q7Z4H3 204 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 SMIM29Q86T20 159 aa4.32□□□□□ -1.72
TM9SF3-202ENST00000443638 OR52E5Q8NH55 327 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms