RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 TFPIP10646 304 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 IL11P20809 199 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 BMP5P22003 454 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 TACR3P29371 465 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 KCNJ5P48544 419 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 SLC7A2P52569 658 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 ZNF136P52737 540 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 RGS8P57771 180 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-211ENST00000443563 PSME3P61289 254 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 LIPEQ05469 1076 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 DMTNQ08495 405 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 RNPS1Q15287 305 aaKnown RBP9.72□□□□□ -0.85
HDAC6-211ENST00000443563 ADGRG3Q86Y34 549 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 MCEMP1Q8IX19 187 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 SLC15A3Q8IY34 581 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 SLC43A2Q8N370 569 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 LSMEM1Q8N8F7 131 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 OR52E4Q8NGH9 312 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 FNDC9Q8TBE3 224 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 BCAS4Q8TDM0 211 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 DNAJA4Q8WW22 397 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-211ENST00000443563 FIG4Q92562 907 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 ZNF524Q96C55 264 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 INTS12Q96CB8 462 aaKnown RBP9.72□□□□□ -0.85
HDAC6-211ENST00000443563 ZNF845Q96IR2 970 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-211ENST00000443563 OR5B2Q96R09 309 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 TACO1Q9BSH4 297 aaKnown RBP9.72□□□□□ -0.85
HDAC6-211ENST00000443563 PIGMQ9H3S5 423 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 ALG2Q9H553 416 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 C12orf10Q9HB07 376 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 TMEM27Q9HBJ8 222 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 SPAG4Q9NPE6 437 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 CMTM6Q9NX76 183 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 SELENONQ9NZV5 590 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 FOXD3Q9UJU5 478 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-211ENST00000443563 OSGIN1Q9UJX0 560 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 BAG5Q9UL15 447 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 CHST2Q9Y4C5 530 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 DOPEY2Q9Y3R5 2298 aa9.72□□□□□ -0.85
HDAC6-211ENST00000443563 MED12LQ86YW9 2145 aa9.71□□□□□ -0.85
HDAC6-211ENST00000443563 CENPEQ02224 2701 aa9.71□□□□□ -0.85
HDAC6-211ENST00000443563 CCT8L1PA6NM43 557 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 SULT2B1O00204 365 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 NME4O00746 187 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 TPST1O60507 370 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 FMO6PO60774 539 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 GMNNO75496 209 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 GCM2O75603 506 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-211ENST00000443563 PMS2P2O95744 297 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 PNMTP11086 282 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 PRG2P13727 222 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 ENPP1P22413 925 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 SHC1P29353 583 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 KDELR2P33947 212 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 PEX19P40855 299 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 ASCL1P50553 236 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 MXRA7P84157 204 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 ZNF239Q16600 458 aaKnown RBP9.71□□□□□ -0.86
HDAC6-211ENST00000443563 DUSP7Q16829 419 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 GLIPR1L2Q4G1C9 344 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 C16orf89Q6UX73 402 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 TMPPEQ6ZT21 453 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 GCNT2Q8N0V5 402 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 FITM2Q8N6M3 262 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 SMYD1Q8NB12 490 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 NAXEQ8NCW5 288 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 LZICQ8WZA0 190 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 PROX1Q92786 737 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 GMPPAQ96IJ6 420 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-211ENST00000443563 ARHGDIGQ99819 225 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 POTEKPQ9BYX7 375 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 COQ10BQ9H8M1 238 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 SLC24A3Q9HC58 644 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 GP6Q9HCN6 339 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 TMEM181Q9P2C4 612 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 ABCD2Q9UBJ2 740 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 TRAPPC4Q9Y296 219 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 SLC9A8Q9Y2E8 581 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 EMC9Q9Y3B6 208 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 PCNX1Q96RV3 2341 aa9.71□□□□□ -0.86
HDAC6-211ENST00000443563 SETXQ7Z333 2677 aaKnown RBP9.7□□□□□ -0.86
HDAC6-211ENST00000443563 HCFC1P51610 2035 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 SPTAN1Q13813 2472 aaKnown RBP9.7□□□□□ -0.86
HDAC6-211ENST00000443563 A0A1W2PNR3 127 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 A0A1W2PNV4 684 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 NKX2-6A6NCS4 301 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 ELOA3DA6NLF2 546 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-211ENST00000443563 A8MVM7 634 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 FRS3O43559 492 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 EIF1BO60739 113 aaKnown RBP9.7□□□□□ -0.86
HDAC6-211ENST00000443563 PRKD3O94806 890 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 OPN1SWP03999 348 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 FESP07332 822 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 CCNA2P20248 432 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 CD247P20963 164 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 CPA2P48052 419 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 GSK3BP49841 420 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 DIO1P49895 249 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 CTBP2P56545 445 aa9.7□□□□□ -0.86
HDAC6-211ENST00000443563 SLC35A1P78382 337 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms