RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 PCNX3Q9H6A9 2034 aa11.07□□□□□ -0.64
USP1-203ENST00000442679 UTP20O75691 2785 aaKnown RBP11.06□□□□□ -0.64
USP1-203ENST00000442679 A0A1W2PNR3 127 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 TMEM72A0PK05 275 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 A1L4Q6 167 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 M0R3H8 397 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 CXCR6O00574 342 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 RCBTB2O95199 551 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 CLDN14O95500 239 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 T-ENOLP0DO92 83 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 CALB2P22676 271 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 CLK1P49759 484 aaKnown RBP11.06□□□□□ -0.64
USP1-203ENST00000442679 MAP2K6P52564 334 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 NCALDP61601 193 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 CDSNQ15517 529 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 NRF1Q16656 503 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 SYT14P1Q58G82 188 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 SAMD4BQ5PRF9 694 aaKnown RBP11.06□□□□□ -0.64
USP1-203ENST00000442679 RANBP3LQ86VV4 465 aaPredicted RBP11.06□□□□□ -0.64
USP1-203ENST00000442679 DEFB107AQ8IZN7 70 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 RNF148Q8N7C7 305 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 NAXEQ8NCW5 288 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 LILRB4Q8NHJ6 448 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 FNDC9Q8TBE3 224 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 CA5BP1Q8WTZ4 195 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 PROX1Q92786 737 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 C3orf49Q96BT1 292 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 INTS12Q96CB8 462 aaKnown RBP11.06□□□□□ -0.64
USP1-203ENST00000442679 PSMG3-AS1Q96PY0 264 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 ARHGDIGQ99819 225 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 OR11A1Q9GZK7 315 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 TMEM27Q9HBJ8 222 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 TESQ9UGI8 421 aaKnown RBP11.06□□□□□ -0.64
USP1-203ENST00000442679 PACSIN3Q9UKS6 424 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 BAG5Q9UL15 447 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 MCTS1Q9ULC4 181 aaKnown RBP11.06□□□□□ -0.64
USP1-203ENST00000442679 LRRK2Q5S007 2527 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 HIVEP3Q5T1R4 2406 aa11.06□□□□□ -0.64
USP1-203ENST00000442679 COL12A1Q99715 3063 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 A0A1B0GWA3 101 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 SULT2B1O00204 365 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 ZNF208O43345 1280 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 TPST2O60704 377 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 TMIGD3P0DMS9 266 aaPredicted RBP11.05□□□□□ -0.64
USP1-203ENST00000442679 NCK1P16333 377 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 CTSSP25774 331 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 HTR2AP28223 471 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 CPOXP36551 454 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 RAC3P60763 192 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 OR1Q1Q15612 314 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 OR2A2Q6IF42 318 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 RINLQ6ZS11 566 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 TMPPEQ6ZT21 453 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 ATG4DQ86TL0 474 aaPredicted RBP11.05□□□□□ -0.64
USP1-203ENST00000442679 RBM45Q8IUH3 476 aaKnown RBP11.05□□□□□ -0.64
USP1-203ENST00000442679 LIX1LQ8IVB5 337 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 LSMEM1Q8N8F7 131 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 RBM15BQ8NDT2 890 aaKnown RBP11.05□□□□□ -0.64
USP1-203ENST00000442679 OR4D11Q8NGI4 311 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 OR6T1Q8NGN1 323 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 VANGL1Q8TAA9 524 aaPredicted RBP11.05□□□□□ -0.64
USP1-203ENST00000442679 ROBO4Q8WZ75 1007 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 DDIT4LQ96D03 193 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 ZFP3Q96NJ6 502 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 MCHR1Q99705 422 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 SRXN1Q9BYN0 137 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 UCK2Q9BZX2 261 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 COQ10BQ9H8M1 238 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 SELENONQ9NZV5 590 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 ZNF629Q9UEG4 869 aaPredicted RBP11.05□□□□□ -0.64
USP1-203ENST00000442679 EGFL7Q9UHF1 273 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 SLC9A8Q9Y2E8 581 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 SH3GLB1Q9Y371 365 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 HDGFL3Q9Y3E1 203 aa11.05□□□□□ -0.64
USP1-203ENST00000442679 MED12Q93074 2177 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 ELOA3DA6NLF2 546 aaPredicted RBP11.04□□□□□ -0.64
USP1-203ENST00000442679 FAM90A27PA6NNH2 459 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 A8MVM7 634 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 TMEM229AB2RXF0 380 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 FMO6PO60774 539 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 GMNNO75496 209 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 AQP8O94778 261 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 CLDN1O95832 211 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 FCGR2AP12318 317 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 GGT1P19440 569 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 TCN1P20061 433 aaPredicted RBP11.04□□□□□ -0.64
USP1-203ENST00000442679 TNFRSF1BP20333 461 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 BMP5P22003 454 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 HTR1EP28566 365 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 OPRM1P35372 400 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 DIO1P49895 249 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 AGFG1P52594 562 aaKnown RBP11.04□□□□□ -0.64
USP1-203ENST00000442679 SELENOWP63302 87 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 CSNK2A1P68400 391 aaPredicted RBP11.04□□□□□ -0.64
USP1-203ENST00000442679 FOXF2Q12947 444 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 BNIP2Q12982 314 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 MYBPHQ13203 477 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 NPTX1Q15818 432 aa11.04□□□□□ -0.64
USP1-203ENST00000442679 ZNF239Q16600 458 aaKnown RBP11.04□□□□□ -0.64
USP1-203ENST00000442679 ELOA3BQ3SY89 546 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms