RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 DHCR7Q9UBM7 475 aaKnown RBP13.06□□□□□ -0.32
LIMD1-202ENST00000440097 KCNE5Q9UJ90 142 aa13.06□□□□□ -0.32
LIMD1-202ENST00000440097 DUX1O43812 170 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 BRINP1O60477 761 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 OR5F1O95221 314 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PTGS2P35354 604 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PER3P56645 1201 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PPP3R1P63098 170 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PSG6Q00889 435 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 TSPAN31Q12999 210 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PRAMEF17Q5VTA0 474 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 SLC35F3Q8IY50 421 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 TIGD4Q8IY51 512 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 OR8H3Q8N146 312 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PPIL3Q9H2H8 161 aaKnown RBP13.05□□□□□ -0.32
LIMD1-202ENST00000440097 EPHA6Q9UF33 1036 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 DTX4Q9Y2E6 619 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 LINC00862A6NCI5 91 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 INMT-MINDY4F8WBC2 141 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 I3L521 148 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 K7ESF4 209 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 FABP7O15540 132 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 HRO43593 1189 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 RFPL3O75679 317 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 GNSP15586 552 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 ARRB1P49407 418 aaPredicted RBP13.05□□□□□ -0.32
LIMD1-202ENST00000440097 CRTC2Q53ET0 693 aaPredicted RBP13.05□□□□□ -0.32
LIMD1-202ENST00000440097 GARNL3Q5VVW2 1013 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 OGFOD3Q6PK18 319 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 C17orf82Q86X59 251 aaPredicted RBP13.05□□□□□ -0.32
LIMD1-202ENST00000440097 KIF18BQ86Y91 864 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PLXDC1Q8IUK5 500 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 GPR135Q8IZ08 494 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 SDR16C5Q8N3Y7 309 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 SLC25A45Q8N413 288 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 DNASE2BQ8WZ79 361 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 CLDN23Q96B33 292 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PTCHD1Q96NR3 888 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 TM9SF2Q99805 663 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 TMEM43Q9BTV4 400 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 KRCC1Q9NPI7 259 aaPredicted RBP13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PNO1Q9NRX1 252 aaKnown RBP13.05□□□□□ -0.32
LIMD1-202ENST00000440097 PCDHGB7Q9Y5F8 929 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 TMEM131Q92545 1883 aa13.05□□□□□ -0.32
LIMD1-202ENST00000440097 IGHV1OR21-1A0A087WYE8 117 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.04□□□□□ -0.32
LIMD1-202ENST00000440097 CDHR4A6H8M9 788 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 A8MUA0 341 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 PRKNO60260 465 aaPredicted RBP13.04□□□□□ -0.32
LIMD1-202ENST00000440097 APOL3O95236 402 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 PDGFBP01127 241 aaPredicted RBP13.04□□□□□ -0.32
LIMD1-202ENST00000440097 THY1P04216 161 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 ZNF250P15622 560 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 ENPP1P22413 925 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 EMDP50402 254 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 TAGLNQ01995 201 aaKnown RBP13.04□□□□□ -0.32
LIMD1-202ENST00000440097 OR1Q1Q15612 314 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 SLC30A6Q6NXT4 461 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 CD300LDQ6UXZ3 194 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 LAPTM4BQ86VI4 370 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 PRSS58Q8IYP2 241 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 OR52I1Q8NGK6 324 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 SLC38A2Q96QD8 506 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 SOSTQ9BQB4 213 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 Q9N2J8 555 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 CUTCQ9NTM9 273 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 ELF5Q9UKW6 265 aaPredicted RBP13.04□□□□□ -0.32
LIMD1-202ENST00000440097 TRAPPC13A5PLN9 417 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 NUDT21O43809 227 aaKnown RBP13.04□□□□□ -0.32
LIMD1-202ENST00000440097 PRAMEF2O60811 474 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 NKX2-2O95096 273 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 OMPP47874 163 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 INPP1P49441 399 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 AGFG1P52594 562 aaKnown RBP13.04□□□□□ -0.32
LIMD1-202ENST00000440097 ZNF136P52737 540 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 EPHA4P54764 986 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 HSD11B2P80365 405 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 DECR1Q16698 335 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 ZNF782Q6ZMW2 699 aaPredicted RBP13.04□□□□□ -0.32
LIMD1-202ENST00000440097 ADAMTS18Q8TE60 1221 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 TM9SF4Q92544 642 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 PHF21AQ96BD5 680 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 GPR137Q96N19 417 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 MED18Q9BUE0 208 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 TEX12Q9BXU0 123 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 NLGN3Q9NZ94 848 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 POLHQ9Y253 713 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 RP1P56715 2156 aa13.04□□□□□ -0.32
LIMD1-202ENST00000440097 HTR2AP28223 471 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 SF3A2Q15428 464 aaKnown RBP13.03□□□□□ -0.32
LIMD1-202ENST00000440097 PLK5Q496M5 336 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 OR2G6Q5TZ20 316 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 RNLSQ5VYX0 342 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 ZNF57Q68EA5 555 aaPredicted RBP13.03□□□□□ -0.32
LIMD1-202ENST00000440097 TEX261Q6UWH6 196 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 MBOAT2Q6ZWT7 520 aa13.03□□□□□ -0.32
LIMD1-202ENST00000440097 ZNF680Q8NEM1 530 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms