RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 KRT78Q8N1N4 520 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 FAM131CQ96AQ9 280 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 RGMAQ96B86 450 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 RIOK2Q9BVS4 552 aaKnown RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 IFT27Q9BW83 186 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 TMPRSS13Q9BYE2 586 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 BCL2L10Q9HD36 194 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 HRASLSQ9HDD0 168 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 PRSS16Q9NQE7 514 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 HPF1Q9NWY4 346 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 HS3ST2Q9Y278 367 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 KLF2Q9Y5W3 355 aaPredicted RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 CCDC163A0A0D9SF12 145 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 ARPC1BO15143 372 aaKnown RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 CTDSPLO15194 276 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 SUSD5O60279 629 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 RP2O75695 350 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 HMGN1P05114 100 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 SAGP10523 405 aaPredicted RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 FPR3P25089 353 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 AHRP35869 848 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 METAP1P53582 386 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 PSMA6P60900 246 aaKnown RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 TMEM255AQ5JRV8 349 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 OR5M10Q6IEU7 315 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 PLBD1Q6P4A8 553 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 OR10H4Q8NGA5 316 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 KLK6Q92876 244 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 MRGPRX1Q96LB2 322 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 ORAI3Q9BRQ5 295 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 PINK1Q9BXM7 581 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 ABRACLQ9P1F3 81 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 GPR160Q9UJ42 338 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 RCE1Q9Y256 329 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 TCRBV21S2A2A0A5A6 115 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 OR2M5A3KFT3 312 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 GALR3O60755 368 aaPredicted RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 APOC3P02656 99 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 MT-ND5P03915 603 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 NAT2P11245 290 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 S100A11P31949 105 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 ACSM3Q53FZ2 586 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 SLC25A25Q6KCM7 469 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 C22orf39Q6P5X5 142 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 ZNF620Q6ZNG0 422 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 TMUB2Q71RG4 321 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 GID4Q8IVV7 300 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 OR2T33Q8NG76 320 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 SUN3Q8TAQ9 357 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 DIO2Q92813 273 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 ATOH1Q92858 354 aaPredicted RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 F2RL3Q96RI0 385 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 DMRTA2Q96SC8 542 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 YIPF4Q9BSR8 244 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 QRSL1Q9H0R6 528 aaKnown RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 MED20Q9H944 212 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 USP36Q9P275 1121 aaKnown RBP7.92□□□□□ -1.14
HPS4-206ENST00000439453 ZNF69Q9UC07 566 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 PRKAB1Q9Y478 270 aa7.92□□□□□ -1.14
HPS4-206ENST00000439453 LRP4O75096 1905 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 ZNF98A6NK75 572 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 SELENOFO60613 162 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 PTP4A3O75365 173 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 GATBO75879 557 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 APBB3O95704 486 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 CTSLP07711 333 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 BSGP35613 385 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 ACVR1BP36896 505 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 PRLHRP49683 370 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 KHKP50053 298 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 STXBP1P61764 594 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 ST3GAL3Q11203 375 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 TMEM220Q6QAJ8 160 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 GLDNQ6ZMI3 551 aaPredicted RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 MEPCEQ7L2J0 689 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 NKAIN4Q8IVV8 208 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 OR6V1Q8N148 313 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 TRAM1L1Q8N609 369 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 MEIOBQ8N635 442 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 ZNF454Q8N9F8 522 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 C17orf47Q8NEP4 570 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 OR9A1PQ8NGU1 263 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 OR1S1Q8NH92 325 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 SAMD8Q96LT4 415 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 IFT22Q9H7X7 185 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 SCPEP1Q9HB40 452 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 CPNE7Q9UBL6 633 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 D6RAR5 112 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 ITGA10O75578 1167 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 SC5DO75845 299 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 TBX6O95947 436 aaPredicted RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 IGLV3-19P01714 112 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 IFNGR1P15260 489 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 PPP3CBP16298 524 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 BCKDHBP21953 392 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 SEC61A1P61619 476 aaKnown RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 FUT5Q11128 374 aa7.91□□□□□ -1.14
HPS4-206ENST00000439453 GK2Q14410 553 aaPredicted RBP7.91□□□□□ -1.14
HPS4-206ENST00000439453 MAPK14Q16539 360 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms