RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SDR42E2A6NKP2 422 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 C17orf100A8MU93 164 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 TPD52L2O43399 206 aaKnown RBP9.25□□□□□ -0.93
RTN4-211ENST00000438462 CSNK2A2P19784 350 aaPredicted RBP9.25□□□□□ -0.93
RTN4-211ENST00000438462 NR4A1P22736 598 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 PAX7P23759 505 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 PRIM2P49643 509 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 PAX2Q02962 417 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 NPRL3Q12980 569 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 THOC5Q13769 683 aaKnown RBP9.25□□□□□ -0.93
RTN4-211ENST00000438462 DECR1Q16698 335 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 NKPD1Q17RQ9 610 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 ERCC6LQ2NKX8 1250 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 FBXO48Q5FWF7 155 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 RBM20Q5T481 1227 aaKnown RBP9.25□□□□□ -0.93
RTN4-211ENST00000438462 NUDT13Q86X67 352 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 LAS2Q8IYD9 372 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 OR1K1Q8NGR3 316 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 BOD1Q96IK1 185 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 OR5B2Q96R09 309 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 CITED2Q99967 270 aaPredicted RBP9.25□□□□□ -0.93
RTN4-211ENST00000438462 TMEM79Q9BSE2 394 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 MEGF9Q9H1U4 602 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 CRLF2Q9HC73 371 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 BFARQ9NZS9 450 aa9.25□□□□□ -0.93
RTN4-211ENST00000438462 A0A1B0GW55 424 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 ANKRD61A6NGH8 418 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 RNASEK-C17orf49H0YIS7 233 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 BCAS2O75934 225 aaPredicted RBP9.24□□□□□ -0.93
RTN4-211ENST00000438462 H6PDO95479 791 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 DUX4L2P0CJ85 424 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 DUX4L3P0CJ86 424 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 DUX4L5P0CJ88 424 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 DUX4L6P0CJ89 424 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 DUX4L7P0CJ90 424 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 CD1DP15813 335 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 CHATP28329 748 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 SERPINB1P30740 379 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 COPS2P61201 443 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 CDKL1Q00532 357 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 IRF8Q02556 426 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 SELENBP1Q13228 472 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 CHIT1Q13231 466 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 OASLQ15646 514 aaKnown RBP9.24□□□□□ -0.93
RTN4-211ENST00000438462 PCGF3Q3KNV8 242 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 ESCO2Q56NI9 601 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 MED27Q6P2C8 311 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 TMEM154Q6P9G4 183 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 DUX4L9Q6RFH8 374 aaPredicted RBP9.24□□□□□ -0.93
RTN4-211ENST00000438462 OR7G3Q8NG95 312 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 HUS1BQ8NHY5 278 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 CCL17Q92583 94 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 SERPINB12Q96P63 405 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 DPAGT1Q9H3H5 408 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 PATZ1Q9HBE1 687 aaKnown RBP9.24□□□□□ -0.93
RTN4-211ENST00000438462 DUX4Q9UBX2 424 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 DUSP13Q9UII6 198 aa9.24□□□□□ -0.93
RTN4-211ENST00000438462 A0A096LPE4 126 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 IGHV2-70DA0A0C4DH43 119 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 A0A1W2PPZ6 126 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 NCF1BA6NI72 391 aaPredicted RBP9.23□□□□□ -0.93
RTN4-211ENST00000438462 NCF1CA8MVU1 366 aaPredicted RBP9.23□□□□□ -0.93
RTN4-211ENST00000438462 ALG1L2C9J202 215 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 GPR171O14626 319 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 SKAP2O75563 359 aaPredicted RBP9.23□□□□□ -0.93
RTN4-211ENST00000438462 LHBP01229 141 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 PF4P02776 101 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 PF4V1P10720 104 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 NCF1P14598 390 aaPredicted RBP9.23□□□□□ -0.93
RTN4-211ENST00000438462 GATA4P43694 442 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 DIO1P49895 249 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 HNRNPA0Q13151 305 aaKnown RBP9.23□□□□□ -0.93
RTN4-211ENST00000438462 PDAP1Q13442 181 aaKnown RBP9.23□□□□□ -0.93
RTN4-211ENST00000438462 AADACL2Q6P093 401 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 SLC48A1Q6P1K1 146 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 PRUNE1Q86TP1 453 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 FAM169BQ8N8A8 192 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 OR7G2Q8NG99 324 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 ZNF675Q8TD23 568 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 UBE2E3Q969T4 207 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 KLHL29Q96CT2 875 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 MTERF1Q99551 399 aaKnown RBP9.23□□□□□ -0.93
RTN4-211ENST00000438462 PCDHAC1Q9H158 963 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 SAP30LQ9HAJ7 183 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 EDA2RQ9HAV5 297 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 MOV10Q9HCE1 1003 aaKnown RBP9.23□□□□□ -0.93
RTN4-211ENST00000438462 ACOXLQ9NUZ1 547 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 EGFL7Q9UHF1 273 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 CES1P1Q9UKY3 287 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.23□□□□□ -0.93
RTN4-211ENST00000438462 PCDHA9Q9Y5H5 950 aa9.23□□□□□ -0.93
RTN4-211ENST00000438462 A0A1W2PRX2 142 aa9.22□□□□□ -0.93
RTN4-211ENST00000438462 H0YHG0 523 aa9.22□□□□□ -0.93
RTN4-211ENST00000438462 LGI1O95970 557 aa9.22□□□□□ -0.93
RTN4-211ENST00000438462 EPORP19235 508 aa9.22□□□□□ -0.93
RTN4-211ENST00000438462 MAKP20794 623 aa9.22□□□□□ -0.93
RTN4-211ENST00000438462 PTPN7P35236 360 aa9.22□□□□□ -0.93
RTN4-211ENST00000438462 ASMTP46597 345 aa9.22□□□□□ -0.93
RTN4-211ENST00000438462 ARFIP1P53367 373 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms