RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 PBX4Q9BYU1 374 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 EGLN3Q9H6Z9 239 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 APOBEC3GQ9HC16 384 aaKnown RBP10.84□□□□□ -0.67
PTCH1-209ENST00000437951 SLC2A4RGQ9NR83 387 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 CDC123O75794 336 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-209ENST00000437951 CLDN7O95471 211 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 TCRBP04435 133 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 SLC35E2BP0CK96 405 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 SNHG28P0DPA3 235 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 SLC2A1P11166 492 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 CPOQ8IVL8 374 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 PRSS58Q8IYP2 241 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 OR13F1Q8NGS4 319 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 LMF2Q9BU23 707 aaKnown RBP10.84□□□□□ -0.67
PTCH1-209ENST00000437951 KCNG2Q9UJ96 466 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 TNS2Q63HR2 1409 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 BMP4P12644 408 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 CBLP22681 906 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 MSX1P28360 303 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 EPHA4P54764 986 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 P2RY14Q15391 338 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 GUK1Q16774 197 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 PRAMEF19Q5SWL8 479 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 SLX4IPQ5VYV7 408 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 NKAIN3Q8N8D7 197 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 HMGB4Q8WW32 186 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 MEIS3P2A8K0S8 358 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 CA12O43570 354 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 TAL1P17542 331 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-209ENST00000437951 GCAP28676 217 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 BAXQ07812 192 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 ZNF776Q68DI1 518 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-209ENST00000437951 SLC38A6Q8IZM9 456 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 C1orf198Q9H425 327 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 PELI2Q9HAT8 420 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 GPR52Q9Y2T5 361 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 HS3ST4Q9Y661 456 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 C3P01024 1663 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 RTCAO00442 366 aaKnown RBP10.84□□□□□ -0.67
PTCH1-209ENST00000437951 ZNF207O43670 478 aaKnown RBP10.84□□□□□ -0.67
PTCH1-209ENST00000437951 NRLP54845 237 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 RPS18P62269 152 aaKnown RBP10.84□□□□□ -0.67
PTCH1-209ENST00000437951 CAMK2BQ13554 666 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 TMEM183BQ1AE95 376 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 CTSL3PQ5NE16 218 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 DEFB132Q7Z7B7 95 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 TANKQ92844 425 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 UBXN10Q96LJ8 280 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 OR1F2PQ96R84 312 aa10.84□□□□□ -0.67
PTCH1-209ENST00000437951 OR6C68A6NDL8 312 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 UMAD1C9J7I0 102 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 VNN1O95497 513 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 HOXB5P09067 269 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 ADH5P11766 374 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 USF1P22415 310 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-209ENST00000437951 GTDC1Q4AE62 458 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 FAM182AQ5T1J6 154 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 PIWIL3Q7Z3Z3 882 aaKnown RBP10.83□□□□□ -0.68
PTCH1-209ENST00000437951 CMTM2Q8TAZ6 248 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 RIMS3Q9UJD0 308 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 OR5H15A6NDH6 313 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 OR5H14A6NHG9 310 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 OR5H1A6NKK0 313 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 RAF1P04049 648 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 ALPIP09923 528 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 JUNBP17275 347 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-209ENST00000437951 NAT1P18440 290 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 CDC20Q12834 499 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 LTB4RQ15722 352 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 OR52W1Q6IF63 320 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 FBXL22Q6P050 247 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 TMEM135Q86UB9 458 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 FBRSL1Q9HCM7 1045 aaKnown RBP10.83□□□□□ -0.68
PTCH1-209ENST00000437951 STYXL1Q9Y6J8 313 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 TPRP12270 2363 aaKnown RBP10.83□□□□□ -0.68
PTCH1-209ENST00000437951 LGALS8O00214 317 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 GBAP04062 536 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 CTRB1P17538 263 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 APLNRP35414 380 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 WASP42768 502 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 ASAH1Q13510 395 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 RPE65Q16518 533 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 ARHGAP11BQ3KRB8 267 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 CYP27C1Q4G0S4 372 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 CATSPEREQ5SY80 951 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 RNLSQ5VYX0 342 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 CARD17Q5XLA6 110 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 CTRB2Q6GPI1 263 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 OR5M3Q8NGP4 307 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 OR8U1Q8NH10 309 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 AKR7LQ8NHP1 331 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 RHBDD3Q9Y3P4 386 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 XKRY2A2RUG3 117 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 PTHP01270 115 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 ZP3P21754 424 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 NME2P22392 152 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 PTAFRP25105 342 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 GDNFP39905 211 aa10.83□□□□□ -0.68
PTCH1-209ENST00000437951 MRPL21Q7Z2W9 205 aaKnown RBP10.83□□□□□ -0.68
PTCH1-209ENST00000437951 ARNTLO00327 626 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms