RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ZFP57Q9NU63 452 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ALKBH4Q9NXW9 302 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 A0A1W2PPE3 182 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 OR6C65A6NJZ3 312 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ADAM12O43184 909 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 GJB5O95377 273 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 EPXP11678 715 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 GCGRP47871 477 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 Q3ZCU0 254 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 PRRT3Q5FWE3 981 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF626Q68DY1 528 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 TSSK4Q6SA08 328 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 MUC20Q8N307 709 aaPredicted RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 OR2AK2Q8NG84 335 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 HAVCR2Q8TDQ0 301 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 RERGQ96A58 199 aaPredicted RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 CHST6Q9GZX3 395 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 MEPEQ9NQ76 525 aaPredicted RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FBXL3Q9UKT7 428 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 FARSAQ9Y285 508 aaKnown RBP6.93□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF831Q5JPB2 1677 aa6.93□□□□□ -1.3
CPSF6-202ENST00000435070 OR2A4O95047 310 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ATP1B1P05026 303 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 C8GP07360 202 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 S100PP25815 95 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 DDX6P26196 483 aaKnown RBP eCLIP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 MPIP34949 423 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 TP53I3Q53FA7 332 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 MED27Q6P2C8 311 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SPICQ8N5J4 248 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 FCAMRQ8WWV6 532 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SMPDL3BQ92485 455 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 CXorf40BQ96DE9 158 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 OR2A7Q96R45 310 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF649Q9BS31 505 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 RASL12Q9NYN1 266 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF629Q9UEG4 869 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 DENND4AQ7Z401 1863 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 LAMA3Q16787 3333 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 A0A0U1RQF3 1178 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 MANSC4A6NHS7 340 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 KDM4EB2RXH2 506 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 F5H0A9 414 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 PSMD9O00233 223 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 AGPAT2O15120 278 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF432O94892 652 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 PTH2RP49190 550 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 EFNB1P98172 346 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 BATFQ16520 125 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 PARGQ86W56 976 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 NKAIN4Q8IVV8 208 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 NRMQ8IXM6 262 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 NEK7Q8TDX7 302 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 CA5BP1Q8WTZ4 195 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SGK3Q96BR1 496 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZCCHC2Q9C0B9 1178 aaKnown RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SLC25A32Q9H2D1 315 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 CHRDQ9H2X0 955 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 STOX2Q9P2F5 926 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 KLHL9Q9P2J3 617 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 KANTRA0A1W2PQU2 76 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 A0A1W2PRQ8 180 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 PMS2P1A4D2B8 440 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 OR14I1A6ND48 311 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 CCSO14618 274 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 OLFM2O95897 454 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 CD160O95971 181 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 NQO2P16083 231 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 CRYBB1P53674 252 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 OR7A5Q15622 319 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 NDUFA9Q16795 377 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 DPPA4Q7L190 304 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 MORN4Q8NDC4 146 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 PMM1Q92871 262 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 FGF11Q92914 225 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SCAMP4Q969E2 229 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 C14orf79Q96F83 325 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 RHOVQ96L33 236 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 OR14A2Q96R54 314 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 NDC1Q9BTX1 674 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 MRPS18AQ9NVS2 196 aaKnown RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 TAAR2Q9P1P5 351 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SH2B3Q9UQQ2 575 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 HIF3AQ9Y2N7 669 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ENSAO43768 121 aaKnown RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 B4GALT2O60909 372 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SC5DO75845 299 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 NFATC1O95644 943 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SNAI1O95863 264 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 UQCRC2P22695 453 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 NR0B1P51843 470 aaKnown RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 RPS15P62841 145 aaKnown RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 PLEKHN1Q494U1 663 aaPredicted RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 FAM69AQ5T7M9 428 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 HACD4Q5VWC8 232 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 SPRYD7Q5W111 196 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF425Q6IV72 752 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZC3H14Q6PJT7 736 aaKnown RBP6.92□□□□□ -1.3
CPSF6-202ENST00000435070 PNPLA2Q96AD5 504 aa6.92□□□□□ -1.3
CPSF6-202ENST00000435070 ZG16BQ96DA0 208 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms