RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 IMPA1P29218 277 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 CD96P40200 585 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 WASP42768 502 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 RPS13P62277 151 aaKnown RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 DUSP4Q13115 394 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 AIMP2Q13155 320 aaKnown RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 FGFBP1Q14512 234 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 SNAPC1Q16533 368 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 ZNF284Q2VY69 593 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 SPATA46Q5T0L3 261 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 PRAMEF8Q5VWM4 474 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 PRAMEF7Q5VXH5 474 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 SLC22A10Q63ZE4 541 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 HEPHL1Q6MZM0 1159 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 RGS7BPQ6MZT1 257 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 SLC27A4Q6P1M0 643 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 GLB1LQ6UWU2 654 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 LINGO4Q6UY18 593 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 C16orf62Q7Z3J2 963 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 NR2C2APQ86WQ0 139 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 CXorf67Q86X51 503 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 ZNF280BQ86YH2 543 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 TIGD4Q8IY51 512 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 KLHL36Q8N4N3 616 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 SPICQ8N5J4 248 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 MS4A15Q8N5U1 240 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 FAM98AQ8NCA5 519 aaKnown RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 SRFBP1Q8NEF9 429 aaKnown RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 OR4K5Q8NGD3 323 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 OR4D11Q8NGI4 311 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 OR52H1Q8NGJ2 320 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 YIPF5Q969M3 257 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 PHF21AQ96BD5 680 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 INTS12Q96CB8 462 aaKnown RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 TMEM19Q96HH6 336 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 B3GALT6Q96L58 329 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 PRRC1Q96M27 445 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 PTCHD1Q96NR3 888 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 ERMAPQ96PL5 475 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 ZNF607Q96SK3 696 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 UTP23Q9BRU9 249 aaKnown RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 PELOQ9BRX2 385 aaKnown RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 TMEM168Q9H0V1 697 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 CXorf36Q9H7Y0 433 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 GP6Q9HCN6 339 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 MBNL1Q9NR56 388 aaKnown RBP7.47□□□□□ -1.21
VTI1A-202ENST00000432306 RHCGQ9UBD6 479 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 ACSL6Q9UKU0 697 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 ACSL5Q9ULC5 683 aa7.47□□□□□ -1.21
VTI1A-202ENST00000432306 DENND4AQ7Z401 1863 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 A0A0G2JK05 382 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SLC5A10A0PJK1 596 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 CDC14CA4D256 554 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 ANKDD1BA6NHY2 528 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 C2CD4DB7Z1M9 353 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 H3BUI4 141 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SULT1B1O43704 296 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 RGS9O75916 674 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SOX30O94993 753 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 MT-ND5P03915 603 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 ICAM2P13598 275 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 CXCL3P19876 107 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 F8A1P23610 371 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SERPINA4P29622 427 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 BSGP35613 385 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SOX18P35713 384 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 NPY4RP50391 375 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 EPHA5P54756 1037 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 CAV3P56539 151 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 B2MP61769 119 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 RPS7P62081 194 aaKnown RBP7.46□□□□□ -1.22
VTI1A-202ENST00000432306 TSPAN31Q12999 210 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 ELFN2Q5R3F8 820 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 PODNL1Q6PEZ8 512 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 HSD17B13Q7Z5P4 300 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-202ENST00000432306 LINC00346Q8IVM7 164 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 NAXDQ8IW45 347 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 HORMAD2Q8N7B1 307 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 LINC01599Q8WXQ3 324 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SGTBQ96EQ0 304 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SLC38A2Q96QD8 506 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 GAL3ST4Q96RP7 486 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SPATA5L1Q9BVQ7 753 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SGPP1Q9BX95 441 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 CPEB1Q9BZB8 566 aaKnown RBP7.46□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF436Q9C0F3 470 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-202ENST00000432306 SMG9Q9H0W8 520 aaKnown RBP7.46□□□□□ -1.22
VTI1A-202ENST00000432306 MVB12BQ9H7P6 319 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 NANSQ9NR45 359 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 CENPMQ9NSP4 180 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 NUDT15Q9NV35 164 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF224Q9NZL3 707 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 FBXL3Q9UKT7 428 aa7.46□□□□□ -1.22
VTI1A-202ENST00000432306 MAP1BP46821 2468 aaKnown RBP7.46□□□□□ -1.22
VTI1A-202ENST00000432306 A0A1W2PRG6 482 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 PLSCR5A0PG75 271 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 OR6C76A6NM76 312 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 C5orf58C9J3I9 102 aa7.45□□□□□ -1.22
VTI1A-202ENST00000432306 ATP6V1G2-DDX39BF2Z307 99 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms